Protein–RNA interactions for Protein: Q7RTM1

OTOP1, Otopetrin-1, humanhuman

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OTOP1Q7RTM1 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
OTOP1Q7RTM1 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC18.09■□□□□ 0.49
OTOP1Q7RTM1 GRN-214ENST00000589265 1632 ntTSL 5 BASIC18.09■□□□□ 0.49
OTOP1Q7RTM1 BNIP3P1-202ENST00000550043 1585 ntBASIC18.09■□□□□ 0.49
OTOP1Q7RTM1 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
OTOP1Q7RTM1 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC18.09■□□□□ 0.49
OTOP1Q7RTM1 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
OTOP1Q7RTM1 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC18.09■□□□□ 0.49
OTOP1Q7RTM1 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
OTOP1Q7RTM1 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
OTOP1Q7RTM1 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC18.09■□□□□ 0.49
OTOP1Q7RTM1 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
OTOP1Q7RTM1 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
OTOP1Q7RTM1 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC18.09■□□□□ 0.49
OTOP1Q7RTM1 FAM197Y7-201ENST00000432892 766 ntBASIC18.09■□□□□ 0.49
OTOP1Q7RTM1 PTPA-217ENST00000434095 870 ntTSL 2 BASIC18.09■□□□□ 0.49
OTOP1Q7RTM1 ELP6-209ENST00000446787 894 ntTSL 3 BASIC18.09■□□□□ 0.49
OTOP1Q7RTM1 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC18.09■□□□□ 0.49
OTOP1Q7RTM1 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC18.09■□□□□ 0.49
OTOP1Q7RTM1 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
OTOP1Q7RTM1 HNRNPUP1-201ENST00000554987 333 ntBASIC18.09■□□□□ 0.49
OTOP1Q7RTM1 NAT9-222ENST00000583476 583 ntTSL 3 BASIC18.09■□□□□ 0.49
OTOP1Q7RTM1 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC18.09■□□□□ 0.49
OTOP1Q7RTM1 EEF1DP1-201ENST00000585891 896 ntBASIC18.09■□□□□ 0.49
OTOP1Q7RTM1 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
OTOP1Q7RTM1 AC097724.1-201ENST00000609581 426 ntBASIC18.09■□□□□ 0.49
OTOP1Q7RTM1 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
OTOP1Q7RTM1 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
OTOP1Q7RTM1 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
OTOP1Q7RTM1 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
OTOP1Q7RTM1 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC18.09■□□□□ 0.49
OTOP1Q7RTM1 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
OTOP1Q7RTM1 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
OTOP1Q7RTM1 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
OTOP1Q7RTM1 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC18.09■□□□□ 0.49
OTOP1Q7RTM1 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
OTOP1Q7RTM1 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
OTOP1Q7RTM1 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC18.08■□□□□ 0.49
OTOP1Q7RTM1 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC18.08■□□□□ 0.49
OTOP1Q7RTM1 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.49
OTOP1Q7RTM1 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC18.08■□□□□ 0.49
OTOP1Q7RTM1 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC18.08■□□□□ 0.49
OTOP1Q7RTM1 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC18.08■□□□□ 0.49
OTOP1Q7RTM1 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC18.08■□□□□ 0.49
OTOP1Q7RTM1 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC18.08■□□□□ 0.49
OTOP1Q7RTM1 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC18.08■□□□□ 0.49
OTOP1Q7RTM1 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC18.08■□□□□ 0.49
OTOP1Q7RTM1 AC134407.2-201ENST00000625089 1978 ntBASIC18.08■□□□□ 0.49
OTOP1Q7RTM1 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
OTOP1Q7RTM1 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC18.08■□□□□ 0.49
OTOP1Q7RTM1 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC18.08■□□□□ 0.49
OTOP1Q7RTM1 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
OTOP1Q7RTM1 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
OTOP1Q7RTM1 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
OTOP1Q7RTM1 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
OTOP1Q7RTM1 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
OTOP1Q7RTM1 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC18.08■□□□□ 0.48
OTOP1Q7RTM1 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
OTOP1Q7RTM1 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
OTOP1Q7RTM1 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
OTOP1Q7RTM1 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
OTOP1Q7RTM1 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
OTOP1Q7RTM1 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC18.08■□□□□ 0.48
OTOP1Q7RTM1 HOMER2P2-201ENST00000451621 847 ntBASIC18.08■□□□□ 0.48
OTOP1Q7RTM1 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC18.08■□□□□ 0.48
OTOP1Q7RTM1 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC18.08■□□□□ 0.48
OTOP1Q7RTM1 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC18.08■□□□□ 0.48
OTOP1Q7RTM1 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
OTOP1Q7RTM1 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC18.08■□□□□ 0.48
OTOP1Q7RTM1 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC18.08■□□□□ 0.48
OTOP1Q7RTM1 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC18.08■□□□□ 0.48
OTOP1Q7RTM1 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC18.08■□□□□ 0.48
OTOP1Q7RTM1 AC138951.2-201ENST00000623455 1161 ntBASIC18.08■□□□□ 0.48
OTOP1Q7RTM1 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
OTOP1Q7RTM1 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
OTOP1Q7RTM1 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
OTOP1Q7RTM1 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
OTOP1Q7RTM1 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
OTOP1Q7RTM1 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
OTOP1Q7RTM1 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
OTOP1Q7RTM1 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
OTOP1Q7RTM1 AP001282.1-201ENST00000531301 1499 ntBASIC18.07■□□□□ 0.48
OTOP1Q7RTM1 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
OTOP1Q7RTM1 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC18.07■□□□□ 0.48
OTOP1Q7RTM1 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
OTOP1Q7RTM1 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC18.07■□□□□ 0.48
OTOP1Q7RTM1 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
OTOP1Q7RTM1 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
OTOP1Q7RTM1 ACKR1-201ENST00000368121 1240 ntBASIC18.07■□□□□ 0.48
OTOP1Q7RTM1 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
OTOP1Q7RTM1 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC18.07■□□□□ 0.48
OTOP1Q7RTM1 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
OTOP1Q7RTM1 EEF1DP4-201ENST00000446006 880 ntBASIC18.07■□□□□ 0.48
OTOP1Q7RTM1 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC18.07■□□□□ 0.48
OTOP1Q7RTM1 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
OTOP1Q7RTM1 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC18.07■□□□□ 0.48
OTOP1Q7RTM1 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC18.07■□□□□ 0.48
OTOP1Q7RTM1 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC18.07■□□□□ 0.48
OTOP1Q7RTM1 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC18.07■□□□□ 0.48
OTOP1Q7RTM1 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms