Protein–RNA interactions for Protein: Q6STE5

SMARCD3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, humanhuman

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3Q6STE5 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SMARCD3Q6STE5 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
SMARCD3Q6STE5 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
SMARCD3Q6STE5 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC14.44□□□□□ -0.1
SMARCD3Q6STE5 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC14.44□□□□□ -0.1
SMARCD3Q6STE5 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
SMARCD3Q6STE5 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SMARCD3Q6STE5 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SMARCD3Q6STE5 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SMARCD3Q6STE5 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SMARCD3Q6STE5 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SMARCD3Q6STE5 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
SMARCD3Q6STE5 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SMARCD3Q6STE5 AC004987.2-201ENST00000395959 1148 ntBASIC14.44□□□□□ -0.1
SMARCD3Q6STE5 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC14.44□□□□□ -0.1
SMARCD3Q6STE5 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SMARCD3Q6STE5 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC14.44□□□□□ -0.1
SMARCD3Q6STE5 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC14.44□□□□□ -0.1
SMARCD3Q6STE5 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC14.44□□□□□ -0.1
SMARCD3Q6STE5 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC14.44□□□□□ -0.1
SMARCD3Q6STE5 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
SMARCD3Q6STE5 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC14.44□□□□□ -0.1
SMARCD3Q6STE5 AC008267.7-201ENST00000624570 1194 ntBASIC14.44□□□□□ -0.1
SMARCD3Q6STE5 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC14.44□□□□□ -0.1
SMARCD3Q6STE5 AC091951.1-201ENST00000512854 2465 ntBASIC14.44□□□□□ -0.1
SMARCD3Q6STE5 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SMARCD3Q6STE5 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
SMARCD3Q6STE5 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SMARCD3Q6STE5 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC14.44□□□□□ -0.1
SMARCD3Q6STE5 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SMARCD3Q6STE5 ZNF259P1-201ENST00000407656 1365 ntBASIC14.44□□□□□ -0.1
SMARCD3Q6STE5 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
SMARCD3Q6STE5 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SMARCD3Q6STE5 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC14.44□□□□□ -0.1
SMARCD3Q6STE5 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SMARCD3Q6STE5 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
SMARCD3Q6STE5 IL9RP2-201ENST00000423948 1312 ntBASIC14.43□□□□□ -0.1
SMARCD3Q6STE5 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
SMARCD3Q6STE5 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC14.43□□□□□ -0.1
SMARCD3Q6STE5 MECR-202ENST00000373791 2416 ntTSL 2 BASIC14.43□□□□□ -0.1
SMARCD3Q6STE5 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SMARCD3Q6STE5 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SMARCD3Q6STE5 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
SMARCD3Q6STE5 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
SMARCD3Q6STE5 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC14.43□□□□□ -0.1
SMARCD3Q6STE5 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SMARCD3Q6STE5 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
SMARCD3Q6STE5 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC14.43□□□□□ -0.1
SMARCD3Q6STE5 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SMARCD3Q6STE5 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
SMARCD3Q6STE5 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SMARCD3Q6STE5 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SMARCD3Q6STE5 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
SMARCD3Q6STE5 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
SMARCD3Q6STE5 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC14.43□□□□□ -0.1
SMARCD3Q6STE5 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SMARCD3Q6STE5 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SMARCD3Q6STE5 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC14.43□□□□□ -0.1
SMARCD3Q6STE5 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC14.43□□□□□ -0.1
SMARCD3Q6STE5 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC14.43□□□□□ -0.1
SMARCD3Q6STE5 AC027307.2-201ENST00000591252 911 ntBASIC14.43□□□□□ -0.1
SMARCD3Q6STE5 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC14.43□□□□□ -0.1
SMARCD3Q6STE5 NKG7-205ENST00000600427 520 ntTSL 3 BASIC14.43□□□□□ -0.1
SMARCD3Q6STE5 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC14.43□□□□□ -0.1
SMARCD3Q6STE5 AC092865.6-201ENST00000642101 219 ntBASIC14.43□□□□□ -0.1
SMARCD3Q6STE5 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SMARCD3Q6STE5 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
SMARCD3Q6STE5 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC14.43□□□□□ -0.1
SMARCD3Q6STE5 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC14.43□□□□□ -0.1
SMARCD3Q6STE5 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
SMARCD3Q6STE5 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
SMARCD3Q6STE5 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SMARCD3Q6STE5 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC14.43□□□□□ -0.1
SMARCD3Q6STE5 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC14.43□□□□□ -0.1
SMARCD3Q6STE5 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SMARCD3Q6STE5 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SMARCD3Q6STE5 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SMARCD3Q6STE5 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
SMARCD3Q6STE5 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC14.42□□□□□ -0.1
SMARCD3Q6STE5 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SMARCD3Q6STE5 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC14.42□□□□□ -0.1
SMARCD3Q6STE5 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SMARCD3Q6STE5 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SMARCD3Q6STE5 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC14.42□□□□□ -0.1
SMARCD3Q6STE5 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SMARCD3Q6STE5 AC112693.3-201ENST00000624819 1983 ntBASIC14.42□□□□□ -0.1
SMARCD3Q6STE5 CELP-203ENST00000624767 2414 ntTSL 5 BASIC14.42□□□□□ -0.1
SMARCD3Q6STE5 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SMARCD3Q6STE5 C18orf15-201ENST00000623680 2534 ntBASIC14.42□□□□□ -0.1
SMARCD3Q6STE5 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SMARCD3Q6STE5 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
SMARCD3Q6STE5 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SMARCD3Q6STE5 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
SMARCD3Q6STE5 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
SMARCD3Q6STE5 CBR1-202ENST00000399191 838 ntTSL 3 BASIC14.42□□□□□ -0.1
SMARCD3Q6STE5 PP14571-201ENST00000404327 934 ntTSL 2 BASIC14.42□□□□□ -0.1
SMARCD3Q6STE5 AL671277.1-201ENST00000429656 993 ntBASIC14.42□□□□□ -0.1
SMARCD3Q6STE5 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SMARCD3Q6STE5 AL591424.1-201ENST00000442569 1213 ntBASIC14.42□□□□□ -0.1
SMARCD3Q6STE5 RNA5SP410-201ENST00000516285 106 ntBASIC14.42□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 61.4 ms