Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC19.47■□□□□ 0.71
RC3H1Q5TC82 RN7SL11P-201ENST00000471305 293 ntBASIC19.47■□□□□ 0.71
RC3H1Q5TC82 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RC3H1Q5TC82 MESTP3-201ENST00000503460 968 ntBASIC19.47■□□□□ 0.71
RC3H1Q5TC82 FGFR3P5-201ENST00000564496 886 ntBASIC19.47■□□□□ 0.71
RC3H1Q5TC82 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC19.47■□□□□ 0.71
RC3H1Q5TC82 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC19.47■□□□□ 0.71
RC3H1Q5TC82 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RC3H1Q5TC82 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC19.47■□□□□ 0.71
RC3H1Q5TC82 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RC3H1Q5TC82 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC19.47■□□□□ 0.71
RC3H1Q5TC82 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RC3H1Q5TC82 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RC3H1Q5TC82 AC069224.1-201ENST00000566372 1715 ntBASIC19.47■□□□□ 0.71
RC3H1Q5TC82 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
RC3H1Q5TC82 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
RC3H1Q5TC82 AC018695.7-201ENST00000624587 2492 ntBASIC19.47■□□□□ 0.71
RC3H1Q5TC82 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
RC3H1Q5TC82 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
RC3H1Q5TC82 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RC3H1Q5TC82 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RC3H1Q5TC82 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RC3H1Q5TC82 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RC3H1Q5TC82 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RC3H1Q5TC82 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC19.46■□□□□ 0.71
RC3H1Q5TC82 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC19.46■□□□□ 0.71
RC3H1Q5TC82 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RC3H1Q5TC82 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RC3H1Q5TC82 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RC3H1Q5TC82 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RC3H1Q5TC82 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RC3H1Q5TC82 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC19.46■□□□□ 0.71
RC3H1Q5TC82 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RC3H1Q5TC82 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
RC3H1Q5TC82 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RC3H1Q5TC82 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RC3H1Q5TC82 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RC3H1Q5TC82 LDHBP1-201ENST00000455730 1119 ntBASIC19.46■□□□□ 0.71
RC3H1Q5TC82 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC19.46■□□□□ 0.71
RC3H1Q5TC82 MIR5572-201ENST00000583188 137 ntBASIC19.46■□□□□ 0.71
RC3H1Q5TC82 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
RC3H1Q5TC82 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC19.46■□□□□ 0.71
RC3H1Q5TC82 AC091544.8-201ENST00000619490 361 ntBASIC19.46■□□□□ 0.71
RC3H1Q5TC82 AC138466.3-201ENST00000619983 221 ntBASIC19.46■□□□□ 0.71
RC3H1Q5TC82 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RC3H1Q5TC82 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RC3H1Q5TC82 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
RC3H1Q5TC82 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RC3H1Q5TC82 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
RC3H1Q5TC82 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
RC3H1Q5TC82 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC19.46■□□□□ 0.71
RC3H1Q5TC82 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC19.46■□□□□ 0.71
RC3H1Q5TC82 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC19.46■□□□□ 0.71
RC3H1Q5TC82 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC19.46■□□□□ 0.71
RC3H1Q5TC82 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC19.46■□□□□ 0.71
RC3H1Q5TC82 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC19.46■□□□□ 0.71
RC3H1Q5TC82 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
RC3H1Q5TC82 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
RC3H1Q5TC82 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC19.45■□□□□ 0.7
RC3H1Q5TC82 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RC3H1Q5TC82 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
RC3H1Q5TC82 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
RC3H1Q5TC82 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
RC3H1Q5TC82 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
RC3H1Q5TC82 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
RC3H1Q5TC82 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RC3H1Q5TC82 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RC3H1Q5TC82 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RC3H1Q5TC82 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC19.45■□□□□ 0.7
RC3H1Q5TC82 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RC3H1Q5TC82 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
RC3H1Q5TC82 AC011742.3-201ENST00000439053 820 ntBASIC19.45■□□□□ 0.7
RC3H1Q5TC82 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RC3H1Q5TC82 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC19.45■□□□□ 0.7
RC3H1Q5TC82 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC19.45■□□□□ 0.7
RC3H1Q5TC82 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC19.45■□□□□ 0.7
RC3H1Q5TC82 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
RC3H1Q5TC82 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
RC3H1Q5TC82 AL161670.2-201ENST00000557650 1227 ntBASIC19.45■□□□□ 0.7
RC3H1Q5TC82 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC19.45■□□□□ 0.7
RC3H1Q5TC82 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC19.45■□□□□ 0.7
RC3H1Q5TC82 SAMD11P1-201ENST00000571429 661 ntBASIC19.45■□□□□ 0.7
RC3H1Q5TC82 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RC3H1Q5TC82 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC19.45■□□□□ 0.7
RC3H1Q5TC82 AC008736.2-201ENST00000587554 516 ntTSL 2 BASIC19.45■□□□□ 0.7
RC3H1Q5TC82 AC026740.1-201ENST00000607068 791 ntBASIC19.45■□□□□ 0.7
RC3H1Q5TC82 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RC3H1Q5TC82 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RC3H1Q5TC82 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC19.45■□□□□ 0.7
RC3H1Q5TC82 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC19.45■□□□□ 0.7
RC3H1Q5TC82 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
RC3H1Q5TC82 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RC3H1Q5TC82 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC19.45■□□□□ 0.7
RC3H1Q5TC82 AC084364.1-201ENST00000551967 1556 ntBASIC19.44■□□□□ 0.7
RC3H1Q5TC82 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
RC3H1Q5TC82 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC19.44■□□□□ 0.7
RC3H1Q5TC82 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
RC3H1Q5TC82 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RC3H1Q5TC82 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
RC3H1Q5TC82 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC19.44■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 61.4 ms