Protein–RNA interactions for Protein: Q52LC2

ATP6AP1L, V-type proton ATPase subunit S1-like protein, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6AP1LQ52LC2 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ATP6AP1LQ52LC2 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC15.29■□□□□ 0.04
ATP6AP1LQ52LC2 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC15.29■□□□□ 0.04
ATP6AP1LQ52LC2 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ATP6AP1LQ52LC2 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ATP6AP1LQ52LC2 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
ATP6AP1LQ52LC2 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ATP6AP1LQ52LC2 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC15.29■□□□□ 0.04
ATP6AP1LQ52LC2 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
ATP6AP1LQ52LC2 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
ATP6AP1LQ52LC2 SBF1P1-201ENST00000444527 5631 ntBASIC15.28■□□□□ 0.04
ATP6AP1LQ52LC2 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC15.28■□□□□ 0.04
ATP6AP1LQ52LC2 CYP4F24P-201ENST00000586049 1580 ntBASIC15.28■□□□□ 0.04
ATP6AP1LQ52LC2 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC15.28■□□□□ 0.04
ATP6AP1LQ52LC2 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
ATP6AP1LQ52LC2 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
ATP6AP1LQ52LC2 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC15.28■□□□□ 0.04
ATP6AP1LQ52LC2 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ATP6AP1LQ52LC2 AC126365.1-201ENST00000578585 1514 ntBASIC15.28■□□□□ 0.04
ATP6AP1LQ52LC2 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC15.28■□□□□ 0.04
ATP6AP1LQ52LC2 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ATP6AP1LQ52LC2 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
ATP6AP1LQ52LC2 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC15.28■□□□□ 0.04
ATP6AP1LQ52LC2 KRT8P37-201ENST00000451609 1420 ntBASIC15.28■□□□□ 0.04
ATP6AP1LQ52LC2 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
ATP6AP1LQ52LC2 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ATP6AP1LQ52LC2 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
ATP6AP1LQ52LC2 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC15.28■□□□□ 0.04
ATP6AP1LQ52LC2 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC15.28■□□□□ 0.04
ATP6AP1LQ52LC2 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC15.28■□□□□ 0.04
ATP6AP1LQ52LC2 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ATP6AP1LQ52LC2 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC15.28■□□□□ 0.04
ATP6AP1LQ52LC2 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC15.28■□□□□ 0.04
ATP6AP1LQ52LC2 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC15.28■□□□□ 0.04
ATP6AP1LQ52LC2 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC15.28■□□□□ 0.04
ATP6AP1LQ52LC2 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC15.28■□□□□ 0.04
ATP6AP1LQ52LC2 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
ATP6AP1LQ52LC2 AC026979.3-201ENST00000607315 403 ntBASIC15.28■□□□□ 0.04
ATP6AP1LQ52LC2 FAM197Y3-203ENST00000618346 717 ntBASIC15.28■□□□□ 0.04
ATP6AP1LQ52LC2 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
ATP6AP1LQ52LC2 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
ATP6AP1LQ52LC2 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC15.28■□□□□ 0.04
ATP6AP1LQ52LC2 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ATP6AP1LQ52LC2 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ATP6AP1LQ52LC2 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ATP6AP1LQ52LC2 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ATP6AP1LQ52LC2 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC15.28■□□□□ 0.04
ATP6AP1LQ52LC2 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
ATP6AP1LQ52LC2 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
ATP6AP1LQ52LC2 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC15.28■□□□□ 0.04
ATP6AP1LQ52LC2 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ATP6AP1LQ52LC2 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
ATP6AP1LQ52LC2 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
ATP6AP1LQ52LC2 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
ATP6AP1LQ52LC2 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
ATP6AP1LQ52LC2 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
ATP6AP1LQ52LC2 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
ATP6AP1LQ52LC2 KRT8P44-201ENST00000441609 1350 ntBASIC15.27■□□□□ 0.04
ATP6AP1LQ52LC2 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC15.27■□□□□ 0.04
ATP6AP1LQ52LC2 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
ATP6AP1LQ52LC2 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
ATP6AP1LQ52LC2 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
ATP6AP1LQ52LC2 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
ATP6AP1LQ52LC2 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
ATP6AP1LQ52LC2 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
ATP6AP1LQ52LC2 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
ATP6AP1LQ52LC2 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
ATP6AP1LQ52LC2 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
ATP6AP1LQ52LC2 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
ATP6AP1LQ52LC2 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC15.27■□□□□ 0.04
ATP6AP1LQ52LC2 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC15.27■□□□□ 0.04
ATP6AP1LQ52LC2 FAM58CP-201ENST00000435741 640 ntBASIC15.27■□□□□ 0.04
ATP6AP1LQ52LC2 SPDYE11-202ENST00000450699 704 ntBASIC15.27■□□□□ 0.04
ATP6AP1LQ52LC2 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC15.27■□□□□ 0.04
ATP6AP1LQ52LC2 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC15.27■□□□□ 0.04
ATP6AP1LQ52LC2 RNF34-208ENST00000555076 593 ntTSL 3 BASIC15.27■□□□□ 0.04
ATP6AP1LQ52LC2 AP000842.3-202ENST00000569238 1080 ntBASIC15.27■□□□□ 0.04
ATP6AP1LQ52LC2 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
ATP6AP1LQ52LC2 SPDYE9P-201ENST00000570642 692 ntBASIC15.27■□□□□ 0.04
ATP6AP1LQ52LC2 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC15.27■□□□□ 0.04
ATP6AP1LQ52LC2 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC15.27■□□□□ 0.04
ATP6AP1LQ52LC2 SPDYE10P-202ENST00000612005 668 ntBASIC15.27■□□□□ 0.04
ATP6AP1LQ52LC2 SPDYE8P-202ENST00000612377 668 ntBASIC15.27■□□□□ 0.04
ATP6AP1LQ52LC2 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
ATP6AP1LQ52LC2 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC15.27■□□□□ 0.04
ATP6AP1LQ52LC2 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC15.27■□□□□ 0.04
ATP6AP1LQ52LC2 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC15.27■□□□□ 0.04
ATP6AP1LQ52LC2 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
ATP6AP1LQ52LC2 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
ATP6AP1LQ52LC2 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
ATP6AP1LQ52LC2 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC15.27■□□□□ 0.03
ATP6AP1LQ52LC2 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
ATP6AP1LQ52LC2 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
ATP6AP1LQ52LC2 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
ATP6AP1LQ52LC2 STK33-217ENST00000534493 1895 ntTSL 2 BASIC15.27■□□□□ 0.03
ATP6AP1LQ52LC2 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
ATP6AP1LQ52LC2 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
ATP6AP1LQ52LC2 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC15.27■□□□□ 0.03
ATP6AP1LQ52LC2 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC15.26■□□□□ 0.03
ATP6AP1LQ52LC2 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms