Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RNF144AP50876 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC14.71□□□□□ -0.05
RNF144AP50876 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
RNF144AP50876 AL353705.2-201ENST00000428243 662 ntBASIC14.71□□□□□ -0.05
RNF144AP50876 ELP6-209ENST00000446787 894 ntTSL 3 BASIC14.71□□□□□ -0.05
RNF144AP50876 AL139010.1-201ENST00000454878 894 ntBASIC14.71□□□□□ -0.05
RNF144AP50876 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC14.71□□□□□ -0.05
RNF144AP50876 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RNF144AP50876 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC14.71□□□□□ -0.05
RNF144AP50876 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC14.71□□□□□ -0.05
RNF144AP50876 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC14.71□□□□□ -0.05
RNF144AP50876 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RNF144AP50876 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RNF144AP50876 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC14.71□□□□□ -0.05
RNF144AP50876 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC14.71□□□□□ -0.05
RNF144AP50876 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC14.71□□□□□ -0.05
RNF144AP50876 AC139530.3-201ENST00000620344 690 ntBASIC14.71□□□□□ -0.05
RNF144AP50876 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC14.71□□□□□ -0.05
RNF144AP50876 AC093028.1-201ENST00000622998 982 ntBASIC14.71□□□□□ -0.05
RNF144AP50876 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC14.71□□□□□ -0.05
RNF144AP50876 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
RNF144AP50876 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC14.71□□□□□ -0.05
RNF144AP50876 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC14.71□□□□□ -0.05
RNF144AP50876 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RNF144AP50876 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
RNF144AP50876 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC14.71□□□□□ -0.05
RNF144AP50876 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
RNF144AP50876 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC14.71□□□□□ -0.05
RNF144AP50876 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.06
RNF144AP50876 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC14.71□□□□□ -0.06
RNF144AP50876 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RNF144AP50876 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC14.7□□□□□ -0.06
RNF144AP50876 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
RNF144AP50876 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RNF144AP50876 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC14.7□□□□□ -0.06
RNF144AP50876 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC14.7□□□□□ -0.06
RNF144AP50876 DKFZP434H168-201ENST00000567381 1905 ntBASIC14.7□□□□□ -0.06
RNF144AP50876 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC14.7□□□□□ -0.06
RNF144AP50876 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC14.7□□□□□ -0.06
RNF144AP50876 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
RNF144AP50876 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RNF144AP50876 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
RNF144AP50876 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RNF144AP50876 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC14.7□□□□□ -0.06
RNF144AP50876 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
RNF144AP50876 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RNF144AP50876 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
RNF144AP50876 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC14.7□□□□□ -0.06
RNF144AP50876 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC14.7□□□□□ -0.06
RNF144AP50876 RPL30-202ENST00000396070 440 ntTSL 2 BASIC14.7□□□□□ -0.06
RNF144AP50876 TSEN15P1-201ENST00000423257 515 ntBASIC14.7□□□□□ -0.06
RNF144AP50876 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC14.7□□□□□ -0.06
RNF144AP50876 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC14.7□□□□□ -0.06
RNF144AP50876 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC14.7□□□□□ -0.06
RNF144AP50876 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC14.7□□□□□ -0.06
RNF144AP50876 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
RNF144AP50876 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC14.7□□□□□ -0.06
RNF144AP50876 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC14.7□□□□□ -0.06
RNF144AP50876 Z92544.3-201ENST00000624747 417 ntBASIC14.7□□□□□ -0.06
RNF144AP50876 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC14.7□□□□□ -0.06
RNF144AP50876 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RNF144AP50876 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RNF144AP50876 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC14.7□□□□□ -0.06
RNF144AP50876 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
RNF144AP50876 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
RNF144AP50876 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
RNF144AP50876 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RNF144AP50876 AC011477.6-201ENST00000604980 1927 ntBASIC14.7□□□□□ -0.06
RNF144AP50876 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RNF144AP50876 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RNF144AP50876 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
RNF144AP50876 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
RNF144AP50876 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
RNF144AP50876 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC14.7□□□□□ -0.06
RNF144AP50876 API5-202ENST00000420461 2009 ntTSL 2 BASIC14.7□□□□□ -0.06
RNF144AP50876 AL365209.1-201ENST00000624418 6473 ntBASIC14.7□□□□□ -0.06
RNF144AP50876 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
RNF144AP50876 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC14.69□□□□□ -0.06
RNF144AP50876 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC14.69□□□□□ -0.06
RNF144AP50876 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC14.69□□□□□ -0.06
RNF144AP50876 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RNF144AP50876 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
RNF144AP50876 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RNF144AP50876 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
RNF144AP50876 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
RNF144AP50876 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
RNF144AP50876 TKT-202ENST00000423516 2075 ntTSL 2 BASIC14.69□□□□□ -0.06
RNF144AP50876 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
RNF144AP50876 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RNF144AP50876 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
RNF144AP50876 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC14.69□□□□□ -0.06
RNF144AP50876 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
RNF144AP50876 AZGP1P1-201ENST00000411909 902 ntBASIC14.69□□□□□ -0.06
RNF144AP50876 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC14.69□□□□□ -0.06
RNF144AP50876 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC14.69□□□□□ -0.06
RNF144AP50876 PPP6R2P1-201ENST00000450880 1275 ntBASIC14.69□□□□□ -0.06
RNF144AP50876 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC14.69□□□□□ -0.06
RNF144AP50876 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC14.69□□□□□ -0.06
RNF144AP50876 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
RNF144AP50876 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC14.69□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms