Protein–RNA interactions for Protein: P48382

RFX5, DNA-binding protein RFX5, humanhuman

Predicted RBP Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX5P48382 PTP4A1P2-201ENST00000546033 454 ntBASIC19.12■□□□□ 0.65
RFX5P48382 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
RFX5P48382 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC19.12■□□□□ 0.65
RFX5P48382 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC19.12■□□□□ 0.65
RFX5P48382 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC19.12■□□□□ 0.65
RFX5P48382 RPL28-207ENST00000558815 616 ntTSL 2 BASIC19.12■□□□□ 0.65
RFX5P48382 RAB43P1-201ENST00000561790 589 ntBASIC19.12■□□□□ 0.65
RFX5P48382 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC19.12■□□□□ 0.65
RFX5P48382 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
RFX5P48382 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC19.12■□□□□ 0.65
RFX5P48382 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
RFX5P48382 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RFX5P48382 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RFX5P48382 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RFX5P48382 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RFX5P48382 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RFX5P48382 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RFX5P48382 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RFX5P48382 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC19.12■□□□□ 0.65
RFX5P48382 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RFX5P48382 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RFX5P48382 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
RFX5P48382 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.11■□□□□ 0.65
RFX5P48382 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC19.11■□□□□ 0.65
RFX5P48382 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RFX5P48382 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RFX5P48382 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RFX5P48382 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
RFX5P48382 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC19.11■□□□□ 0.65
RFX5P48382 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
RFX5P48382 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RFX5P48382 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RFX5P48382 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC19.11■□□□□ 0.65
RFX5P48382 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
RFX5P48382 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC19.11■□□□□ 0.65
RFX5P48382 BCRP2-202ENST00000447763 634 ntBASIC19.11■□□□□ 0.65
RFX5P48382 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC19.11■□□□□ 0.65
RFX5P48382 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC19.11■□□□□ 0.65
RFX5P48382 BCRP6-201ENST00000510112 632 ntBASIC19.11■□□□□ 0.65
RFX5P48382 BCRP7-201ENST00000511549 544 ntBASIC19.11■□□□□ 0.65
RFX5P48382 IGHV3-71-201ENST00000523324 359 ntBASIC19.11■□□□□ 0.65
RFX5P48382 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC19.11■□□□□ 0.65
RFX5P48382 KSR1-207ENST00000578981 748 ntTSL 4 BASIC19.11■□□□□ 0.65
RFX5P48382 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC19.11■□□□□ 0.65
RFX5P48382 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC19.11■□□□□ 0.65
RFX5P48382 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC19.11■□□□□ 0.65
RFX5P48382 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
RFX5P48382 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
RFX5P48382 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC19.11■□□□□ 0.65
RFX5P48382 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RFX5P48382 AC112693.3-201ENST00000624819 1983 ntBASIC19.11■□□□□ 0.65
RFX5P48382 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RFX5P48382 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.11■□□□□ 0.65
RFX5P48382 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RFX5P48382 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
RFX5P48382 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC19.11■□□□□ 0.65
RFX5P48382 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RFX5P48382 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC19.11■□□□□ 0.65
RFX5P48382 PAUPAR-201ENST00000630360 2965 ntBASIC19.11■□□□□ 0.65
RFX5P48382 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RFX5P48382 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC19.11■□□□□ 0.65
RFX5P48382 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RFX5P48382 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
RFX5P48382 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RFX5P48382 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC19.1■□□□□ 0.65
RFX5P48382 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC19.1■□□□□ 0.65
RFX5P48382 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RFX5P48382 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RFX5P48382 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
RFX5P48382 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC19.1■□□□□ 0.65
RFX5P48382 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RFX5P48382 AC136621.1-201ENST00000624017 2304 ntBASIC19.1■□□□□ 0.65
RFX5P48382 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RFX5P48382 RNU1-114P-201ENST00000365297 166 ntBASIC19.1■□□□□ 0.65
RFX5P48382 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RFX5P48382 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RFX5P48382 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
RFX5P48382 ATP5G2P4-201ENST00000442175 420 ntBASIC19.1■□□□□ 0.65
RFX5P48382 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC19.1■□□□□ 0.65
RFX5P48382 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC19.1■□□□□ 0.65
RFX5P48382 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RFX5P48382 IFT20-216ENST00000588477 774 ntTSL 5 BASIC19.1■□□□□ 0.65
RFX5P48382 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC19.1■□□□□ 0.65
RFX5P48382 AP005019.2-201ENST00000615104 511 ntBASIC19.1■□□□□ 0.65
RFX5P48382 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
RFX5P48382 MIR6775-201ENST00000617557 69 ntBASIC19.1■□□□□ 0.65
RFX5P48382 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC19.1■□□□□ 0.65
RFX5P48382 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC19.1■□□□□ 0.65
RFX5P48382 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RFX5P48382 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RFX5P48382 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC19.1■□□□□ 0.65
RFX5P48382 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
RFX5P48382 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RFX5P48382 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC19.1■□□□□ 0.65
RFX5P48382 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC19.1■□□□□ 0.65
RFX5P48382 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RFX5P48382 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RFX5P48382 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RFX5P48382 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RFX5P48382 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms