Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
KRT9P35527 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
KRT9P35527 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
KRT9P35527 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC17.29■□□□□ 0.36
KRT9P35527 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
KRT9P35527 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
KRT9P35527 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
KRT9P35527 STK33-217ENST00000534493 1895 ntTSL 2 BASIC17.29■□□□□ 0.36
KRT9P35527 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
KRT9P35527 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC17.28■□□□□ 0.36
KRT9P35527 CICP23-201ENST00000605013 2741 ntBASIC17.28■□□□□ 0.36
KRT9P35527 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC17.28■□□□□ 0.36
KRT9P35527 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
KRT9P35527 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
KRT9P35527 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
KRT9P35527 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
KRT9P35527 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
KRT9P35527 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
KRT9P35527 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
KRT9P35527 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
KRT9P35527 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
KRT9P35527 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
KRT9P35527 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
KRT9P35527 PP14571-201ENST00000404327 934 ntTSL 2 BASIC17.28■□□□□ 0.36
KRT9P35527 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC17.28■□□□□ 0.36
KRT9P35527 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC17.28■□□□□ 0.36
KRT9P35527 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC17.28■□□□□ 0.36
KRT9P35527 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC17.28■□□□□ 0.36
KRT9P35527 KRT8P23-201ENST00000560090 1207 ntBASIC17.28■□□□□ 0.36
KRT9P35527 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC17.28■□□□□ 0.36
KRT9P35527 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC17.28■□□□□ 0.36
KRT9P35527 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC17.28■□□□□ 0.36
KRT9P35527 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC17.28■□□□□ 0.36
KRT9P35527 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC17.28■□□□□ 0.36
KRT9P35527 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC17.28■□□□□ 0.36
KRT9P35527 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC17.28■□□□□ 0.36
KRT9P35527 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
KRT9P35527 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC17.28■□□□□ 0.36
KRT9P35527 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC17.28■□□□□ 0.36
KRT9P35527 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
KRT9P35527 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
KRT9P35527 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
KRT9P35527 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
KRT9P35527 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
KRT9P35527 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
KRT9P35527 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
KRT9P35527 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC17.28■□□□□ 0.36
KRT9P35527 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
KRT9P35527 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
KRT9P35527 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
KRT9P35527 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.36
KRT9P35527 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
KRT9P35527 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC17.27■□□□□ 0.36
KRT9P35527 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC17.27■□□□□ 0.36
KRT9P35527 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC17.27■□□□□ 0.36
KRT9P35527 FOXO1B-201ENST00000504678 1527 ntBASIC17.27■□□□□ 0.36
KRT9P35527 AC126365.1-201ENST00000578585 1514 ntBASIC17.27■□□□□ 0.36
KRT9P35527 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
KRT9P35527 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
KRT9P35527 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
KRT9P35527 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC17.27■□□□□ 0.36
KRT9P35527 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
KRT9P35527 LINC01101-201ENST00000622953 1884 ntBASIC17.27■□□□□ 0.36
KRT9P35527 MARS-233ENST00000628866 2583 ntTSL 5 BASIC17.27■□□□□ 0.36
KRT9P35527 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
KRT9P35527 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
KRT9P35527 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC17.27■□□□□ 0.36
KRT9P35527 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
KRT9P35527 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC17.27■□□□□ 0.36
KRT9P35527 BX842568.4-201ENST00000421222 227 ntBASIC17.27■□□□□ 0.36
KRT9P35527 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC17.27■□□□□ 0.36
KRT9P35527 AL592309.1-201ENST00000443127 649 ntBASIC17.27■□□□□ 0.36
KRT9P35527 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC17.27■□□□□ 0.36
KRT9P35527 LINC01225-203ENST00000563550 1244 ntBASIC17.27■□□□□ 0.36
KRT9P35527 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC17.27■□□□□ 0.36
KRT9P35527 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
KRT9P35527 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC17.27■□□□□ 0.36
KRT9P35527 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC17.27■□□□□ 0.36
KRT9P35527 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
KRT9P35527 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
KRT9P35527 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC17.27■□□□□ 0.36
KRT9P35527 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC17.27■□□□□ 0.36
KRT9P35527 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
KRT9P35527 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
KRT9P35527 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
KRT9P35527 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
KRT9P35527 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
KRT9P35527 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
KRT9P35527 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
KRT9P35527 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
KRT9P35527 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC17.27■□□□□ 0.35
KRT9P35527 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
KRT9P35527 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
KRT9P35527 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
KRT9P35527 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
KRT9P35527 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC17.27■□□□□ 0.35
KRT9P35527 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
KRT9P35527 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
KRT9P35527 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
KRT9P35527 UXT-AS1-201ENST00000590504 1525 ntBASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms