Protein–RNA interactions for Protein: P17655

CAPN2, Calpain-2 catalytic subunit, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN2P17655 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CAPN2P17655 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
CAPN2P17655 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
CAPN2P17655 AC092384.3-202ENST00000564646 2873 ntBASIC18.2■□□□□ 0.5
CAPN2P17655 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CAPN2P17655 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CAPN2P17655 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CAPN2P17655 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
CAPN2P17655 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CAPN2P17655 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CAPN2P17655 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CAPN2P17655 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CAPN2P17655 MIR1247-201ENST00000408206 136 ntBASIC18.2■□□□□ 0.5
CAPN2P17655 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC18.2■□□□□ 0.5
CAPN2P17655 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC18.2■□□□□ 0.5
CAPN2P17655 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC18.2■□□□□ 0.5
CAPN2P17655 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC18.2■□□□□ 0.5
CAPN2P17655 EMC4-209ENST00000559421 497 ntTSL 2 BASIC18.2■□□□□ 0.5
CAPN2P17655 AC133539.2-201ENST00000604757 467 ntBASIC18.2■□□□□ 0.5
CAPN2P17655 WNT11-204ENST00000621122 789 ntTSL 5 BASIC18.2■□□□□ 0.5
CAPN2P17655 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
CAPN2P17655 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC18.2■□□□□ 0.5
CAPN2P17655 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CAPN2P17655 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC18.2■□□□□ 0.5
CAPN2P17655 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
CAPN2P17655 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC18.2■□□□□ 0.5
CAPN2P17655 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CAPN2P17655 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CAPN2P17655 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
CAPN2P17655 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CAPN2P17655 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
CAPN2P17655 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC18.2■□□□□ 0.5
CAPN2P17655 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC18.2■□□□□ 0.5
CAPN2P17655 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CAPN2P17655 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CAPN2P17655 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
CAPN2P17655 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CAPN2P17655 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
CAPN2P17655 CICP13-201ENST00000422015 2789 ntBASIC18.19■□□□□ 0.5
CAPN2P17655 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC18.19■□□□□ 0.5
CAPN2P17655 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC18.19■□□□□ 0.5
CAPN2P17655 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
CAPN2P17655 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC18.19■□□□□ 0.5
CAPN2P17655 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
CAPN2P17655 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC18.19■□□□□ 0.5
CAPN2P17655 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CAPN2P17655 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
CAPN2P17655 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC18.19■□□□□ 0.5
CAPN2P17655 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
CAPN2P17655 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CAPN2P17655 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
CAPN2P17655 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CAPN2P17655 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CAPN2P17655 DPM2-202ENST00000373110 738 ntTSL 2 BASIC18.19■□□□□ 0.5
CAPN2P17655 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
CAPN2P17655 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CAPN2P17655 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC18.19■□□□□ 0.5
CAPN2P17655 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC18.19■□□□□ 0.5
CAPN2P17655 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC18.19■□□□□ 0.5
CAPN2P17655 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC18.19■□□□□ 0.5
CAPN2P17655 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC18.19■□□□□ 0.5
CAPN2P17655 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CAPN2P17655 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC18.19■□□□□ 0.5
CAPN2P17655 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
CAPN2P17655 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CAPN2P17655 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CAPN2P17655 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CAPN2P17655 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
CAPN2P17655 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
CAPN2P17655 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CAPN2P17655 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC18.19■□□□□ 0.5
CAPN2P17655 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC18.19■□□□□ 0.5
CAPN2P17655 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CAPN2P17655 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CAPN2P17655 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CAPN2P17655 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CAPN2P17655 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CAPN2P17655 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CAPN2P17655 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CAPN2P17655 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CAPN2P17655 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CAPN2P17655 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CAPN2P17655 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC18.18■□□□□ 0.5
CAPN2P17655 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC18.18■□□□□ 0.5
CAPN2P17655 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CAPN2P17655 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CAPN2P17655 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
CAPN2P17655 ZBTB12BP-201ENST00000314232 1122 ntBASIC18.18■□□□□ 0.5
CAPN2P17655 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CAPN2P17655 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC18.18■□□□□ 0.5
CAPN2P17655 YBX1P6-201ENST00000442962 1002 ntBASIC18.18■□□□□ 0.5
CAPN2P17655 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC18.18■□□□□ 0.5
CAPN2P17655 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC18.18■□□□□ 0.5
CAPN2P17655 USB1-203ENST00000539737 1212 ntTSL 2 BASIC18.18■□□□□ 0.5
CAPN2P17655 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC18.18■□□□□ 0.5
CAPN2P17655 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CAPN2P17655 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC18.18■□□□□ 0.5
CAPN2P17655 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
CAPN2P17655 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CAPN2P17655 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms