Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC13.89□□□□□ -0.19
UBCP0CG48 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
UBCP0CG48 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
UBCP0CG48 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
UBCP0CG48 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
UBCP0CG48 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
UBCP0CG48 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
UBCP0CG48 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
UBCP0CG48 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
UBCP0CG48 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC13.88□□□□□ -0.19
UBCP0CG48 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
UBCP0CG48 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
UBCP0CG48 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
UBCP0CG48 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
UBCP0CG48 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
UBCP0CG48 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
UBCP0CG48 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
UBCP0CG48 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
UBCP0CG48 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
UBCP0CG48 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
UBCP0CG48 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
UBCP0CG48 FAM220BP-201ENST00000377689 816 ntBASIC13.88□□□□□ -0.19
UBCP0CG48 AL645939.2-201ENST00000427340 991 ntBASIC13.88□□□□□ -0.19
UBCP0CG48 TPM4P1-201ENST00000436100 807 ntBASIC13.88□□□□□ -0.19
UBCP0CG48 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC13.88□□□□□ -0.19
UBCP0CG48 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
UBCP0CG48 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC13.88□□□□□ -0.19
UBCP0CG48 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC13.88□□□□□ -0.19
UBCP0CG48 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC13.88□□□□□ -0.19
UBCP0CG48 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC13.88□□□□□ -0.19
UBCP0CG48 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC13.88□□□□□ -0.19
UBCP0CG48 FAM86C2P-203ENST00000528684 1004 ntBASIC13.88□□□□□ -0.19
UBCP0CG48 NKG7-205ENST00000600427 520 ntTSL 3 BASIC13.88□□□□□ -0.19
UBCP0CG48 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
UBCP0CG48 FOXO1B-201ENST00000504678 1527 ntBASIC13.88□□□□□ -0.19
UBCP0CG48 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
UBCP0CG48 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
UBCP0CG48 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
UBCP0CG48 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
UBCP0CG48 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC13.88□□□□□ -0.19
UBCP0CG48 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
UBCP0CG48 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
UBCP0CG48 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC13.88□□□□□ -0.19
UBCP0CG48 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
UBCP0CG48 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC13.88□□□□□ -0.19
UBCP0CG48 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
UBCP0CG48 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
UBCP0CG48 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC13.87□□□□□ -0.19
UBCP0CG48 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
UBCP0CG48 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC13.87□□□□□ -0.19
UBCP0CG48 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC13.87□□□□□ -0.19
UBCP0CG48 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
UBCP0CG48 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
UBCP0CG48 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
UBCP0CG48 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
UBCP0CG48 AC018892.3-201ENST00000623986 2499 ntBASIC13.87□□□□□ -0.19
UBCP0CG48 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC13.87□□□□□ -0.19
UBCP0CG48 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC13.87□□□□□ -0.19
UBCP0CG48 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
UBCP0CG48 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
UBCP0CG48 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
UBCP0CG48 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
UBCP0CG48 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
UBCP0CG48 AC126365.1-201ENST00000578585 1514 ntBASIC13.87□□□□□ -0.19
UBCP0CG48 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
UBCP0CG48 NEK7-201ENST00000367383 586 ntTSL 2 BASIC13.87□□□□□ -0.19
UBCP0CG48 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC13.87□□□□□ -0.19
UBCP0CG48 AL355306.1-201ENST00000415580 579 ntBASIC13.87□□□□□ -0.19
UBCP0CG48 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
UBCP0CG48 AL591424.1-201ENST00000442569 1213 ntBASIC13.87□□□□□ -0.19
UBCP0CG48 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC13.87□□□□□ -0.19
UBCP0CG48 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC13.87□□□□□ -0.19
UBCP0CG48 AL135744.1-201ENST00000565098 629 ntBASIC13.87□□□□□ -0.19
UBCP0CG48 MIR4313-201ENST00000580760 101 ntBASIC13.87□□□□□ -0.19
UBCP0CG48 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC13.87□□□□□ -0.19
UBCP0CG48 AC027307.2-201ENST00000591252 911 ntBASIC13.87□□□□□ -0.19
UBCP0CG48 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC13.87□□□□□ -0.19
UBCP0CG48 AL450472.2-201ENST00000603663 1156 ntBASIC13.87□□□□□ -0.19
UBCP0CG48 AL513190.1-201ENST00000621254 727 ntBASIC13.87□□□□□ -0.19
UBCP0CG48 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC13.87□□□□□ -0.19
UBCP0CG48 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
UBCP0CG48 AC127383.1-201ENST00000444697 1800 ntBASIC13.87□□□□□ -0.19
UBCP0CG48 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC13.87□□□□□ -0.19
UBCP0CG48 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
UBCP0CG48 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
UBCP0CG48 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
UBCP0CG48 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC13.87□□□□□ -0.19
UBCP0CG48 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC13.87□□□□□ -0.19
UBCP0CG48 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
UBCP0CG48 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
UBCP0CG48 MECR-202ENST00000373791 2416 ntTSL 2 BASIC13.86□□□□□ -0.19
UBCP0CG48 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
UBCP0CG48 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC13.86□□□□□ -0.19
UBCP0CG48 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC13.86□□□□□ -0.19
UBCP0CG48 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC13.86□□□□□ -0.19
UBCP0CG48 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
UBCP0CG48 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
UBCP0CG48 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
UBCP0CG48 ZNF259P1-201ENST00000407656 1365 ntBASIC13.86□□□□□ -0.19
UBCP0CG48 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 67.5 ms