Protein–RNA interactions for Protein: P07333

CSF1R, Macrophage colony-stimulating factor 1 receptor, humanhuman

Predictions only

Length 972 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1RP07333 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC19.13■□□□□ 0.65
CSF1RP07333 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CSF1RP07333 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CSF1RP07333 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CSF1RP07333 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CSF1RP07333 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CSF1RP07333 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC19.12■□□□□ 0.65
CSF1RP07333 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CSF1RP07333 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CSF1RP07333 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
CSF1RP07333 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC19.12■□□□□ 0.65
CSF1RP07333 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC19.12■□□□□ 0.65
CSF1RP07333 AL158070.2-201ENST00000623713 1621 ntBASIC19.12■□□□□ 0.65
CSF1RP07333 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CSF1RP07333 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
CSF1RP07333 FAM86MP-201ENST00000340703 885 ntBASIC19.12■□□□□ 0.65
CSF1RP07333 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CSF1RP07333 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CSF1RP07333 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CSF1RP07333 RPL5P21-201ENST00000404620 815 ntBASIC19.12■□□□□ 0.65
CSF1RP07333 AL139094.1-201ENST00000405549 1188 ntBASIC19.12■□□□□ 0.65
CSF1RP07333 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CSF1RP07333 ACTBP11-201ENST00000436287 1126 ntBASIC19.12■□□□□ 0.65
CSF1RP07333 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC19.12■□□□□ 0.65
CSF1RP07333 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CSF1RP07333 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC19.12■□□□□ 0.65
CSF1RP07333 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
CSF1RP07333 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC19.12■□□□□ 0.65
CSF1RP07333 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CSF1RP07333 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC19.12■□□□□ 0.65
CSF1RP07333 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CSF1RP07333 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC19.12■□□□□ 0.65
CSF1RP07333 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC19.12■□□□□ 0.65
CSF1RP07333 INO80C-210ENST00000590757 595 ntTSL 2 BASIC19.12■□□□□ 0.65
CSF1RP07333 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC19.12■□□□□ 0.65
CSF1RP07333 ETV2-208ENST00000621247 941 ntTSL 5 BASIC19.12■□□□□ 0.65
CSF1RP07333 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CSF1RP07333 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CSF1RP07333 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
CSF1RP07333 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
CSF1RP07333 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CSF1RP07333 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC19.12■□□□□ 0.65
CSF1RP07333 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CSF1RP07333 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CSF1RP07333 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
CSF1RP07333 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC19.11■□□□□ 0.65
CSF1RP07333 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CSF1RP07333 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC19.11■□□□□ 0.65
CSF1RP07333 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
CSF1RP07333 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CSF1RP07333 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CSF1RP07333 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CSF1RP07333 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CSF1RP07333 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CSF1RP07333 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC19.11■□□□□ 0.65
CSF1RP07333 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
CSF1RP07333 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC19.11■□□□□ 0.65
CSF1RP07333 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC19.11■□□□□ 0.65
CSF1RP07333 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CSF1RP07333 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
CSF1RP07333 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CSF1RP07333 LSM5-207ENST00000410044 687 ntTSL 3 BASIC19.11■□□□□ 0.65
CSF1RP07333 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC19.11■□□□□ 0.65
CSF1RP07333 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC19.11■□□□□ 0.65
CSF1RP07333 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CSF1RP07333 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CSF1RP07333 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC19.11■□□□□ 0.65
CSF1RP07333 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CSF1RP07333 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CSF1RP07333 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CSF1RP07333 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC19.11■□□□□ 0.65
CSF1RP07333 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CSF1RP07333 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CSF1RP07333 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CSF1RP07333 STK33-217ENST00000534493 1895 ntTSL 2 BASIC19.11■□□□□ 0.65
CSF1RP07333 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CSF1RP07333 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CSF1RP07333 OR6D1P-202ENST00000641007 5290 ntBASIC19.11■□□□□ 0.65
CSF1RP07333 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC19.11■□□□□ 0.65
CSF1RP07333 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC19.11■□□□□ 0.65
CSF1RP07333 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC19.1■□□□□ 0.65
CSF1RP07333 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
CSF1RP07333 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CSF1RP07333 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC19.1■□□□□ 0.65
CSF1RP07333 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
CSF1RP07333 TNRC18P3-201ENST00000441896 2691 ntBASIC19.1■□□□□ 0.65
CSF1RP07333 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
CSF1RP07333 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC19.1■□□□□ 0.65
CSF1RP07333 DOC2GP-204ENST00000639052 2548 ntBASIC19.1■□□□□ 0.65
CSF1RP07333 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CSF1RP07333 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CSF1RP07333 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CSF1RP07333 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CSF1RP07333 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
CSF1RP07333 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CSF1RP07333 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
CSF1RP07333 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CSF1RP07333 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CSF1RP07333 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CSF1RP07333 RNA5SP486-201ENST00000515961 83 ntBASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms