Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CHGBP05060 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
CHGBP05060 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CHGBP05060 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
CHGBP05060 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
CHGBP05060 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC18.82■□□□□ 0.6
CHGBP05060 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CHGBP05060 AC112693.3-201ENST00000624819 1983 ntBASIC18.82■□□□□ 0.6
CHGBP05060 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC18.82■□□□□ 0.6
CHGBP05060 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CHGBP05060 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
CHGBP05060 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
CHGBP05060 CICP11-201ENST00000434745 2827 ntBASIC18.82■□□□□ 0.6
CHGBP05060 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
CHGBP05060 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CHGBP05060 RERG-209ENST00000546331 1383 ntTSL 2 BASIC18.81■□□□□ 0.6
CHGBP05060 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC18.81■□□□□ 0.6
CHGBP05060 MYB-201ENST00000316528 3571 ntTSL 5 BASIC18.81■□□□□ 0.6
CHGBP05060 MYB-241ENST00000616088 3573 ntTSL 5 BASIC18.81■□□□□ 0.6
CHGBP05060 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CHGBP05060 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CHGBP05060 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CHGBP05060 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CHGBP05060 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC18.81■□□□□ 0.6
CHGBP05060 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CHGBP05060 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CHGBP05060 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CHGBP05060 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
CHGBP05060 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CHGBP05060 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
CHGBP05060 PKIG-203ENST00000372887 769 ntTSL 3 BASIC18.81■□□□□ 0.6
CHGBP05060 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
CHGBP05060 COX5BP8-201ENST00000416911 349 ntBASIC18.81■□□□□ 0.6
CHGBP05060 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC18.81■□□□□ 0.6
CHGBP05060 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC18.81■□□□□ 0.6
CHGBP05060 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC18.81■□□□□ 0.6
CHGBP05060 VDAC1P7-201ENST00000462417 847 ntBASIC18.81■□□□□ 0.6
CHGBP05060 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CHGBP05060 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC18.81■□□□□ 0.6
CHGBP05060 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC18.81■□□□□ 0.6
CHGBP05060 AL359711.2-201ENST00000563105 872 ntBASIC18.81■□□□□ 0.6
CHGBP05060 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC18.81■□□□□ 0.6
CHGBP05060 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
CHGBP05060 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CHGBP05060 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
CHGBP05060 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CHGBP05060 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CHGBP05060 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CHGBP05060 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CHGBP05060 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC18.81■□□□□ 0.6
CHGBP05060 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CHGBP05060 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CHGBP05060 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
CHGBP05060 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC18.81■□□□□ 0.6
CHGBP05060 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CHGBP05060 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CHGBP05060 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CHGBP05060 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CHGBP05060 FES-204ENST00000414248 2327 ntTSL 2 BASIC18.8■□□□□ 0.6
CHGBP05060 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
CHGBP05060 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CHGBP05060 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CHGBP05060 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CHGBP05060 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
CHGBP05060 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CHGBP05060 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC18.8■□□□□ 0.6
CHGBP05060 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
CHGBP05060 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
CHGBP05060 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC18.8■□□□□ 0.6
CHGBP05060 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CHGBP05060 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CHGBP05060 CYP2AB1P-202ENST00000454440 1456 ntBASIC18.8■□□□□ 0.6
CHGBP05060 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CHGBP05060 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CHGBP05060 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CHGBP05060 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC18.8■□□□□ 0.6
CHGBP05060 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC18.8■□□□□ 0.6
CHGBP05060 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CHGBP05060 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC18.8■□□□□ 0.6
CHGBP05060 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
CHGBP05060 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC18.8■□□□□ 0.6
CHGBP05060 KRT18P43-201ENST00000469825 1281 ntBASIC18.8■□□□□ 0.6
CHGBP05060 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC18.8■□□□□ 0.6
CHGBP05060 AC132938.2-201ENST00000579188 680 ntBASIC18.8■□□□□ 0.6
CHGBP05060 BRI3BPP1-201ENST00000594224 787 ntBASIC18.8■□□□□ 0.6
CHGBP05060 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC18.8■□□□□ 0.6
CHGBP05060 IGHV3-72-202ENST00000621503 303 ntBASIC18.8■□□□□ 0.6
CHGBP05060 AL591163.1-201ENST00000641757 987 ntBASIC18.8■□□□□ 0.6
CHGBP05060 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
CHGBP05060 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CHGBP05060 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CHGBP05060 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CHGBP05060 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CHGBP05060 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CHGBP05060 AC091951.1-201ENST00000512854 2465 ntBASIC18.8■□□□□ 0.6
CHGBP05060 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CHGBP05060 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CHGBP05060 AC084364.1-201ENST00000551967 1556 ntBASIC18.8■□□□□ 0.6
CHGBP05060 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CHGBP05060 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms