Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC14.39□□□□□ -0.11
NPIPA2E9PIF3 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC14.39□□□□□ -0.11
NPIPA2E9PIF3 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC14.39□□□□□ -0.11
NPIPA2E9PIF3 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC14.39□□□□□ -0.11
NPIPA2E9PIF3 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC14.39□□□□□ -0.11
NPIPA2E9PIF3 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
NPIPA2E9PIF3 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
NPIPA2E9PIF3 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NPIPA2E9PIF3 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NPIPA2E9PIF3 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
NPIPA2E9PIF3 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC14.39□□□□□ -0.11
NPIPA2E9PIF3 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
NPIPA2E9PIF3 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
NPIPA2E9PIF3 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC14.39□□□□□ -0.11
NPIPA2E9PIF3 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NPIPA2E9PIF3 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC14.39□□□□□ -0.11
NPIPA2E9PIF3 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NPIPA2E9PIF3 AC024909.3-201ENST00000611513 2257 ntBASIC14.39□□□□□ -0.11
NPIPA2E9PIF3 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
NPIPA2E9PIF3 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
NPIPA2E9PIF3 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NPIPA2E9PIF3 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC14.39□□□□□ -0.11
NPIPA2E9PIF3 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC14.38□□□□□ -0.11
NPIPA2E9PIF3 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
NPIPA2E9PIF3 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
NPIPA2E9PIF3 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
NPIPA2E9PIF3 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC14.38□□□□□ -0.11
NPIPA2E9PIF3 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC14.38□□□□□ -0.11
NPIPA2E9PIF3 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
NPIPA2E9PIF3 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
NPIPA2E9PIF3 AC018695.7-201ENST00000624587 2492 ntBASIC14.38□□□□□ -0.11
NPIPA2E9PIF3 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC14.38□□□□□ -0.11
NPIPA2E9PIF3 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NPIPA2E9PIF3 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NPIPA2E9PIF3 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC14.38□□□□□ -0.11
NPIPA2E9PIF3 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NPIPA2E9PIF3 LINC02447-202ENST00000501888 2146 ntBASIC14.38□□□□□ -0.11
NPIPA2E9PIF3 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
NPIPA2E9PIF3 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC14.38□□□□□ -0.11
NPIPA2E9PIF3 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
NPIPA2E9PIF3 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NPIPA2E9PIF3 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
NPIPA2E9PIF3 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NPIPA2E9PIF3 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NPIPA2E9PIF3 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NPIPA2E9PIF3 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
NPIPA2E9PIF3 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
NPIPA2E9PIF3 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
NPIPA2E9PIF3 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC14.38□□□□□ -0.11
NPIPA2E9PIF3 AC004987.2-201ENST00000395959 1148 ntBASIC14.38□□□□□ -0.11
NPIPA2E9PIF3 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC14.38□□□□□ -0.11
NPIPA2E9PIF3 HIST3H2BA-201ENST00000436555 524 ntBASIC14.38□□□□□ -0.11
NPIPA2E9PIF3 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC14.38□□□□□ -0.11
NPIPA2E9PIF3 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC14.38□□□□□ -0.11
NPIPA2E9PIF3 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC14.38□□□□□ -0.11
NPIPA2E9PIF3 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC14.38□□□□□ -0.11
NPIPA2E9PIF3 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC14.38□□□□□ -0.11
NPIPA2E9PIF3 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
NPIPA2E9PIF3 AC123567.1-201ENST00000548294 1261 ntBASIC14.38□□□□□ -0.11
NPIPA2E9PIF3 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
NPIPA2E9PIF3 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC14.38□□□□□ -0.11
NPIPA2E9PIF3 AL008721.1-201ENST00000609964 604 ntBASIC14.38□□□□□ -0.11
NPIPA2E9PIF3 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NPIPA2E9PIF3 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NPIPA2E9PIF3 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
NPIPA2E9PIF3 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NPIPA2E9PIF3 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC14.38□□□□□ -0.11
NPIPA2E9PIF3 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC14.38□□□□□ -0.11
NPIPA2E9PIF3 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NPIPA2E9PIF3 CDC14C-201ENST00000428251 1719 ntBASIC14.38□□□□□ -0.11
NPIPA2E9PIF3 AL603832.2-201ENST00000566195 2125 ntBASIC14.38□□□□□ -0.11
NPIPA2E9PIF3 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC14.38□□□□□ -0.11
NPIPA2E9PIF3 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC14.38□□□□□ -0.11
NPIPA2E9PIF3 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC14.38□□□□□ -0.11
NPIPA2E9PIF3 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC14.37□□□□□ -0.11
NPIPA2E9PIF3 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
NPIPA2E9PIF3 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NPIPA2E9PIF3 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NPIPA2E9PIF3 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
NPIPA2E9PIF3 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC14.37□□□□□ -0.11
NPIPA2E9PIF3 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
NPIPA2E9PIF3 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
NPIPA2E9PIF3 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC14.37□□□□□ -0.11
NPIPA2E9PIF3 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
NPIPA2E9PIF3 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
NPIPA2E9PIF3 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
NPIPA2E9PIF3 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NPIPA2E9PIF3 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
NPIPA2E9PIF3 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
NPIPA2E9PIF3 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
NPIPA2E9PIF3 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
NPIPA2E9PIF3 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC14.37□□□□□ -0.11
NPIPA2E9PIF3 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC14.37□□□□□ -0.11
NPIPA2E9PIF3 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
NPIPA2E9PIF3 GIMAP3P-201ENST00000495150 836 ntBASIC14.37□□□□□ -0.11
NPIPA2E9PIF3 SUOX-214ENST00000551841 906 ntTSL 3 BASIC14.37□□□□□ -0.11
NPIPA2E9PIF3 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC14.37□□□□□ -0.11
NPIPA2E9PIF3 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NPIPA2E9PIF3 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
NPIPA2E9PIF3 AC069224.1-201ENST00000566372 1715 ntBASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms