Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC11.1□□□□□ -0.63
LINC01546A6NGU7 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC11.1□□□□□ -0.63
LINC01546A6NGU7 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
LINC01546A6NGU7 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC11.1□□□□□ -0.63
LINC01546A6NGU7 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC11.1□□□□□ -0.63
LINC01546A6NGU7 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
LINC01546A6NGU7 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
LINC01546A6NGU7 CCDC74BP1-201ENST00000508880 1123 ntBASIC11.1□□□□□ -0.63
LINC01546A6NGU7 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC11.1□□□□□ -0.63
LINC01546A6NGU7 AC022616.7-201ENST00000525383 220 ntBASIC11.1□□□□□ -0.63
LINC01546A6NGU7 FICD-205ENST00000552758 603 ntTSL 2 BASIC11.1□□□□□ -0.63
LINC01546A6NGU7 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
LINC01546A6NGU7 AP002414.4-201ENST00000589764 1148 ntBASIC11.1□□□□□ -0.63
LINC01546A6NGU7 CYGB-205ENST00000590175 830 ntTSL 3 BASIC11.1□□□□□ -0.63
LINC01546A6NGU7 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
LINC01546A6NGU7 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC11.1□□□□□ -0.63
LINC01546A6NGU7 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
LINC01546A6NGU7 AC138894.3-201ENST00000603787 634 ntBASIC11.1□□□□□ -0.63
LINC01546A6NGU7 IGHV3OR16-7-201ENST00000604106 360 ntBASIC11.1□□□□□ -0.63
LINC01546A6NGU7 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC11.1□□□□□ -0.63
LINC01546A6NGU7 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
LINC01546A6NGU7 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC11.1□□□□□ -0.63
LINC01546A6NGU7 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC11.1□□□□□ -0.63
LINC01546A6NGU7 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
LINC01546A6NGU7 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
LINC01546A6NGU7 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
LINC01546A6NGU7 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
LINC01546A6NGU7 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
LINC01546A6NGU7 KRT8P24-201ENST00000560290 1559 ntBASIC11.1□□□□□ -0.63
LINC01546A6NGU7 AC015909.5-201ENST00000624336 2266 ntBASIC11.1□□□□□ -0.63
LINC01546A6NGU7 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
LINC01546A6NGU7 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
LINC01546A6NGU7 AL356585.2-201ENST00000625078 2396 ntBASIC11.1□□□□□ -0.63
LINC01546A6NGU7 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
LINC01546A6NGU7 INTS4P1-203ENST00000641008 3683 ntBASIC11.1□□□□□ -0.63
LINC01546A6NGU7 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
LINC01546A6NGU7 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
LINC01546A6NGU7 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC11.09□□□□□ -0.63
LINC01546A6NGU7 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC11.09□□□□□ -0.63
LINC01546A6NGU7 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
LINC01546A6NGU7 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
LINC01546A6NGU7 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
LINC01546A6NGU7 CICP8-201ENST00000455800 2813 ntBASIC11.09□□□□□ -0.63
LINC01546A6NGU7 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC11.09□□□□□ -0.63
LINC01546A6NGU7 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC11.09□□□□□ -0.63
LINC01546A6NGU7 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
LINC01546A6NGU7 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
LINC01546A6NGU7 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
LINC01546A6NGU7 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
LINC01546A6NGU7 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
LINC01546A6NGU7 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC11.09□□□□□ -0.63
LINC01546A6NGU7 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
LINC01546A6NGU7 EMD-201ENST00000369835 966 ntTSL 3 BASIC11.09□□□□□ -0.63
LINC01546A6NGU7 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
LINC01546A6NGU7 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
LINC01546A6NGU7 AC004945.1-201ENST00000416738 983 ntBASIC11.09□□□□□ -0.63
LINC01546A6NGU7 NUS1P2-201ENST00000417358 873 ntBASIC11.09□□□□□ -0.63
LINC01546A6NGU7 LAGE3P1-201ENST00000425356 484 ntBASIC11.09□□□□□ -0.63
LINC01546A6NGU7 RPS8P6-201ENST00000426177 609 ntBASIC11.09□□□□□ -0.63
LINC01546A6NGU7 KRT18P27-201ENST00000427733 1299 ntBASIC11.09□□□□□ -0.63
LINC01546A6NGU7 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC11.09□□□□□ -0.63
LINC01546A6NGU7 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC11.09□□□□□ -0.63
LINC01546A6NGU7 IGHV3-65-201ENST00000523210 341 ntBASIC11.09□□□□□ -0.63
LINC01546A6NGU7 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC11.09□□□□□ -0.63
LINC01546A6NGU7 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC11.09□□□□□ -0.63
LINC01546A6NGU7 AC061975.2-201ENST00000581722 295 ntBASIC11.09□□□□□ -0.63
LINC01546A6NGU7 AC099336.1-202ENST00000602961 463 ntBASIC11.09□□□□□ -0.63
LINC01546A6NGU7 AC069148.1-201ENST00000608741 768 ntBASIC11.09□□□□□ -0.63
LINC01546A6NGU7 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC11.09□□□□□ -0.63
LINC01546A6NGU7 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC11.09□□□□□ -0.63
LINC01546A6NGU7 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC11.09□□□□□ -0.63
LINC01546A6NGU7 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
LINC01546A6NGU7 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
LINC01546A6NGU7 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
LINC01546A6NGU7 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
LINC01546A6NGU7 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC11.09□□□□□ -0.63
LINC01546A6NGU7 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
LINC01546A6NGU7 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
LINC01546A6NGU7 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
LINC01546A6NGU7 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
LINC01546A6NGU7 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
LINC01546A6NGU7 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
LINC01546A6NGU7 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
LINC01546A6NGU7 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
LINC01546A6NGU7 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
LINC01546A6NGU7 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC11.09□□□□□ -0.63
LINC01546A6NGU7 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
LINC01546A6NGU7 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC11.09□□□□□ -0.63
LINC01546A6NGU7 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
LINC01546A6NGU7 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC11.09□□□□□ -0.63
LINC01546A6NGU7 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
LINC01546A6NGU7 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
LINC01546A6NGU7 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
LINC01546A6NGU7 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC11.09□□□□□ -0.63
LINC01546A6NGU7 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC11.08□□□□□ -0.63
LINC01546A6NGU7 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC11.08□□□□□ -0.64
LINC01546A6NGU7 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
LINC01546A6NGU7 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
LINC01546A6NGU7 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
LINC01546A6NGU7 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 66.7 ms