Protein–RNA interactions for Protein: A3KN83

SBNO1, Protein strawberry notch homolog 1, humanhuman

Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SBNO1A3KN83 MFF-204ENST00000353339 2186 ntTSL 5 BASIC20.98■□□□□ 0.95
SBNO1A3KN83 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
SBNO1A3KN83 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SBNO1A3KN83 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC20.98■□□□□ 0.95
SBNO1A3KN83 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SBNO1A3KN83 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SBNO1A3KN83 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC20.98■□□□□ 0.95
SBNO1A3KN83 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC20.97■□□□□ 0.95
SBNO1A3KN83 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SBNO1A3KN83 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SBNO1A3KN83 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC20.97■□□□□ 0.95
SBNO1A3KN83 CHMP1AP1-201ENST00000445563 662 ntBASIC20.97■□□□□ 0.95
SBNO1A3KN83 RN7SL11P-201ENST00000471305 293 ntBASIC20.97■□□□□ 0.95
SBNO1A3KN83 AC024681.1-201ENST00000521917 487 ntBASIC20.97■□□□□ 0.95
SBNO1A3KN83 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC20.97■□□□□ 0.95
SBNO1A3KN83 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SBNO1A3KN83 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC20.97■□□□□ 0.95
SBNO1A3KN83 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC20.97■□□□□ 0.95
SBNO1A3KN83 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SBNO1A3KN83 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SBNO1A3KN83 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SBNO1A3KN83 AC008132.1-202ENST00000342005 1389 ntBASIC20.97■□□□□ 0.95
SBNO1A3KN83 PGR-209ENST00000617858 2816 ntTSL 5 BASIC20.97■□□□□ 0.95
SBNO1A3KN83 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
SBNO1A3KN83 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC20.97■□□□□ 0.95
SBNO1A3KN83 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
SBNO1A3KN83 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SBNO1A3KN83 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SBNO1A3KN83 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SBNO1A3KN83 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC20.97■□□□□ 0.95
SBNO1A3KN83 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SBNO1A3KN83 CRCP-204ENST00000398684 492 ntTSL 2 BASIC20.97■□□□□ 0.95
SBNO1A3KN83 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
SBNO1A3KN83 EIF3FP3-201ENST00000434851 1086 ntBASIC20.97■□□□□ 0.95
SBNO1A3KN83 HIST2H2BB-201ENST00000449108 381 ntBASIC20.97■□□□□ 0.95
SBNO1A3KN83 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SBNO1A3KN83 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC20.97■□□□□ 0.95
SBNO1A3KN83 PRKXP1-201ENST00000561423 1122 ntBASIC20.97■□□□□ 0.95
SBNO1A3KN83 AP001002.3-201ENST00000623482 206 ntBASIC20.97■□□□□ 0.95
SBNO1A3KN83 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
SBNO1A3KN83 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
SBNO1A3KN83 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SBNO1A3KN83 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SBNO1A3KN83 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SBNO1A3KN83 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC20.96■□□□□ 0.95
SBNO1A3KN83 LRRC59-203ENST00000576448 1531 ntBASIC20.96■□□□□ 0.95
SBNO1A3KN83 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
SBNO1A3KN83 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC20.96■□□□□ 0.95
SBNO1A3KN83 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC20.96■□□□□ 0.95
SBNO1A3KN83 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SBNO1A3KN83 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SBNO1A3KN83 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
SBNO1A3KN83 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC20.96■□□□□ 0.95
SBNO1A3KN83 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC20.96■□□□□ 0.95
SBNO1A3KN83 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SBNO1A3KN83 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC20.96■□□□□ 0.95
SBNO1A3KN83 AC124067.4-201ENST00000519691 2379 ntBASIC20.96■□□□□ 0.95
SBNO1A3KN83 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SBNO1A3KN83 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
SBNO1A3KN83 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SBNO1A3KN83 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SBNO1A3KN83 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SBNO1A3KN83 LSM5-207ENST00000410044 687 ntTSL 3 BASIC20.96■□□□□ 0.95
SBNO1A3KN83 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC20.96■□□□□ 0.95
SBNO1A3KN83 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC20.96■□□□□ 0.95
SBNO1A3KN83 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SBNO1A3KN83 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC20.96■□□□□ 0.95
SBNO1A3KN83 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SBNO1A3KN83 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SBNO1A3KN83 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC20.96■□□□□ 0.95
SBNO1A3KN83 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC20.96■□□□□ 0.95
SBNO1A3KN83 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SBNO1A3KN83 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC20.95■□□□□ 0.94
SBNO1A3KN83 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SBNO1A3KN83 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
SBNO1A3KN83 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
SBNO1A3KN83 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SBNO1A3KN83 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
SBNO1A3KN83 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC20.95■□□□□ 0.94
SBNO1A3KN83 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SBNO1A3KN83 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SBNO1A3KN83 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
SBNO1A3KN83 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
SBNO1A3KN83 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC20.95■□□□□ 0.94
SBNO1A3KN83 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
SBNO1A3KN83 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC20.95■□□□□ 0.94
SBNO1A3KN83 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SBNO1A3KN83 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SBNO1A3KN83 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC20.95■□□□□ 0.94
SBNO1A3KN83 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SBNO1A3KN83 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SBNO1A3KN83 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SBNO1A3KN83 RPL17P11-201ENST00000417593 544 ntBASIC20.95■□□□□ 0.94
SBNO1A3KN83 AC007274.2-201ENST00000421675 662 ntBASIC20.95■□□□□ 0.94
SBNO1A3KN83 MSRA-203ENST00000441698 788 ntTSL 2 BASIC20.95■□□□□ 0.94
SBNO1A3KN83 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC20.95■□□□□ 0.94
SBNO1A3KN83 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
SBNO1A3KN83 MBP-227ENST00000526111 581 ntTSL 4 BASIC20.95■□□□□ 0.94
SBNO1A3KN83 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC20.95■□□□□ 0.94
SBNO1A3KN83 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC20.95■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 115.4 ms