Protein–RNA interactions for Protein: Q9H078

CLPB, Caseinolytic peptidase B protein homolog, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPBQ9H078 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC23.43■■□□□ 1.34
CLPBQ9H078 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC23.43■■□□□ 1.34
CLPBQ9H078 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
CLPBQ9H078 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
CLPBQ9H078 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC23.42■■□□□ 1.34
CLPBQ9H078 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
CLPBQ9H078 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC23.42■■□□□ 1.34
CLPBQ9H078 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC23.42■■□□□ 1.34
CLPBQ9H078 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC23.42■■□□□ 1.34
CLPBQ9H078 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC23.42■■□□□ 1.34
CLPBQ9H078 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC23.41■■□□□ 1.34
CLPBQ9H078 KRT18P24-201ENST00000344739 1156 ntBASIC23.41■■□□□ 1.34
CLPBQ9H078 Z92544.1-202ENST00000571933 1220 ntBASIC23.41■■□□□ 1.34
CLPBQ9H078 THA1P-201ENST00000590384 1145 ntBASIC23.41■■□□□ 1.34
CLPBQ9H078 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
CLPBQ9H078 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
CLPBQ9H078 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
CLPBQ9H078 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
CLPBQ9H078 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC23.4■■□□□ 1.34
CLPBQ9H078 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC23.4■■□□□ 1.34
CLPBQ9H078 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC23.39■■□□□ 1.34
CLPBQ9H078 MED17-227ENST00000640521 2047 ntTSL 5 BASIC23.39■■□□□ 1.34
CLPBQ9H078 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC23.39■■□□□ 1.33
CLPBQ9H078 AC131212.1-201ENST00000613771 668 ntBASIC23.39■■□□□ 1.33
CLPBQ9H078 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
CLPBQ9H078 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC23.39■■□□□ 1.33
CLPBQ9H078 FOXO3B-201ENST00000395675 1928 ntBASIC23.39■■□□□ 1.33
CLPBQ9H078 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
CLPBQ9H078 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
CLPBQ9H078 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC23.38■■□□□ 1.33
CLPBQ9H078 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
CLPBQ9H078 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
CLPBQ9H078 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
CLPBQ9H078 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC23.38■■□□□ 1.33
CLPBQ9H078 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC23.37■■□□□ 1.33
CLPBQ9H078 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC23.37■■□□□ 1.33
CLPBQ9H078 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC23.37■■□□□ 1.33
CLPBQ9H078 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
CLPBQ9H078 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
CLPBQ9H078 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC23.37■■□□□ 1.33
CLPBQ9H078 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
CLPBQ9H078 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
CLPBQ9H078 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
CLPBQ9H078 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
CLPBQ9H078 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC23.37■■□□□ 1.33
CLPBQ9H078 AL356441.2-201ENST00000443009 864 ntBASIC23.37■■□□□ 1.33
CLPBQ9H078 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC23.37■■□□□ 1.33
CLPBQ9H078 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
CLPBQ9H078 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC23.37■■□□□ 1.33
CLPBQ9H078 AC138932.3-201ENST00000567634 1902 ntBASIC23.37■■□□□ 1.33
CLPBQ9H078 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
CLPBQ9H078 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC23.36■■□□□ 1.33
CLPBQ9H078 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC23.36■■□□□ 1.33
CLPBQ9H078 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
CLPBQ9H078 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC23.36■■□□□ 1.33
CLPBQ9H078 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
CLPBQ9H078 CREM-229ENST00000474362 1030 ntTSL 2 BASIC23.36■■□□□ 1.33
CLPBQ9H078 AC120024.1-201ENST00000562672 995 ntBASIC23.36■■□□□ 1.33
CLPBQ9H078 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC23.36■■□□□ 1.33
CLPBQ9H078 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC23.35■■□□□ 1.33
CLPBQ9H078 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
CLPBQ9H078 AL592295.1-201ENST00000400984 884 ntBASIC23.35■■□□□ 1.33
CLPBQ9H078 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC23.35■■□□□ 1.33
CLPBQ9H078 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
CLPBQ9H078 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC23.34■■□□□ 1.33
CLPBQ9H078 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
CLPBQ9H078 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC23.34■■□□□ 1.33
CLPBQ9H078 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
CLPBQ9H078 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC23.34■■□□□ 1.33
CLPBQ9H078 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC23.34■■□□□ 1.33
CLPBQ9H078 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC23.33■■□□□ 1.33
CLPBQ9H078 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC23.33■■□□□ 1.33
CLPBQ9H078 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
CLPBQ9H078 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
CLPBQ9H078 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC23.33■■□□□ 1.33
CLPBQ9H078 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC23.33■■□□□ 1.32
CLPBQ9H078 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
CLPBQ9H078 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
CLPBQ9H078 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CLPBQ9H078 BX664725.1-201ENST00000438252 379 ntBASIC23.32■■□□□ 1.32
CLPBQ9H078 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CLPBQ9H078 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC23.32■■□□□ 1.32
CLPBQ9H078 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC23.32■■□□□ 1.32
CLPBQ9H078 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
CLPBQ9H078 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CLPBQ9H078 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CLPBQ9H078 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CLPBQ9H078 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CLPBQ9H078 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC23.31■■□□□ 1.32
CLPBQ9H078 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC23.31■■□□□ 1.32
CLPBQ9H078 KRT125P-201ENST00000546827 989 ntBASIC23.31■■□□□ 1.32
CLPBQ9H078 MIR4787-201ENST00000607364 84 ntBASIC23.31■■□□□ 1.32
CLPBQ9H078 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CLPBQ9H078 AP003733.4-201ENST00000623785 1697 ntBASIC23.31■■□□□ 1.32
CLPBQ9H078 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC23.3■■□□□ 1.32
CLPBQ9H078 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC23.3■■□□□ 1.32
CLPBQ9H078 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CLPBQ9H078 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CLPBQ9H078 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC23.3■■□□□ 1.32
CLPBQ9H078 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC23.3■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms