Protein–RNA interactions for Protein: Q9BWW7

SCRT1, Transcriptional repressor scratch 1, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCRT1Q9BWW7 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SCRT1Q9BWW7 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
SCRT1Q9BWW7 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SCRT1Q9BWW7 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC18.67■□□□□ 0.58
SCRT1Q9BWW7 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SCRT1Q9BWW7 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SCRT1Q9BWW7 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SCRT1Q9BWW7 ZNRF2P2-203ENST00000454624 420 ntBASIC18.67■□□□□ 0.58
SCRT1Q9BWW7 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC18.67■□□□□ 0.58
SCRT1Q9BWW7 DUX4L11-201ENST00000611504 1267 ntBASIC18.67■□□□□ 0.58
SCRT1Q9BWW7 DUX4L12-201ENST00000614593 1267 ntBASIC18.67■□□□□ 0.58
SCRT1Q9BWW7 DUX4L14-201ENST00000621227 1267 ntBASIC18.67■□□□□ 0.58
SCRT1Q9BWW7 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SCRT1Q9BWW7 SLC6A10P-202ENST00000431994 2058 ntBASIC18.67■□□□□ 0.58
SCRT1Q9BWW7 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC18.67■□□□□ 0.58
SCRT1Q9BWW7 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SCRT1Q9BWW7 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC18.66■□□□□ 0.58
SCRT1Q9BWW7 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SCRT1Q9BWW7 AC148477.6-201ENST00000623746 465 ntBASIC18.66■□□□□ 0.58
SCRT1Q9BWW7 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC18.66■□□□□ 0.58
SCRT1Q9BWW7 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
SCRT1Q9BWW7 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SCRT1Q9BWW7 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SCRT1Q9BWW7 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC18.65■□□□□ 0.58
SCRT1Q9BWW7 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SCRT1Q9BWW7 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SCRT1Q9BWW7 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SCRT1Q9BWW7 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.58
SCRT1Q9BWW7 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
SCRT1Q9BWW7 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC18.64■□□□□ 0.58
SCRT1Q9BWW7 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SCRT1Q9BWW7 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SCRT1Q9BWW7 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SCRT1Q9BWW7 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC18.64■□□□□ 0.57
SCRT1Q9BWW7 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SCRT1Q9BWW7 AC137767.1-201ENST00000602918 1920 ntBASIC18.64■□□□□ 0.57
SCRT1Q9BWW7 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SCRT1Q9BWW7 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
SCRT1Q9BWW7 AL359258.2-201ENST00000564063 1566 ntBASIC18.64■□□□□ 0.57
SCRT1Q9BWW7 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC18.63■□□□□ 0.57
SCRT1Q9BWW7 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
SCRT1Q9BWW7 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
SCRT1Q9BWW7 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
SCRT1Q9BWW7 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SCRT1Q9BWW7 CHST11-203ENST00000547956 936 ntTSL 2 BASIC18.63■□□□□ 0.57
SCRT1Q9BWW7 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SCRT1Q9BWW7 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
SCRT1Q9BWW7 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SCRT1Q9BWW7 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
SCRT1Q9BWW7 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SCRT1Q9BWW7 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SCRT1Q9BWW7 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC18.62■□□□□ 0.57
SCRT1Q9BWW7 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SCRT1Q9BWW7 HES6-205ENST00000409356 528 ntTSL 2 BASIC18.62■□□□□ 0.57
SCRT1Q9BWW7 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SCRT1Q9BWW7 HLA-V-202ENST00000446817 847 ntBASIC18.62■□□□□ 0.57
SCRT1Q9BWW7 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC18.62■□□□□ 0.57
SCRT1Q9BWW7 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SCRT1Q9BWW7 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SCRT1Q9BWW7 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SCRT1Q9BWW7 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SCRT1Q9BWW7 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC18.62■□□□□ 0.57
SCRT1Q9BWW7 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SCRT1Q9BWW7 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SCRT1Q9BWW7 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
SCRT1Q9BWW7 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC18.61■□□□□ 0.57
SCRT1Q9BWW7 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
SCRT1Q9BWW7 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SCRT1Q9BWW7 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
SCRT1Q9BWW7 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SCRT1Q9BWW7 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SCRT1Q9BWW7 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SCRT1Q9BWW7 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SCRT1Q9BWW7 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC18.61■□□□□ 0.57
SCRT1Q9BWW7 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SCRT1Q9BWW7 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SCRT1Q9BWW7 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SCRT1Q9BWW7 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC18.6■□□□□ 0.57
SCRT1Q9BWW7 AC007375.3-201ENST00000600936 2314 ntBASIC18.6■□□□□ 0.57
SCRT1Q9BWW7 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SCRT1Q9BWW7 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SCRT1Q9BWW7 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC18.6■□□□□ 0.57
SCRT1Q9BWW7 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SCRT1Q9BWW7 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
SCRT1Q9BWW7 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SCRT1Q9BWW7 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
SCRT1Q9BWW7 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SCRT1Q9BWW7 AL359504.2-201ENST00000605506 1601 ntBASIC18.6■□□□□ 0.57
SCRT1Q9BWW7 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC18.59■□□□□ 0.57
SCRT1Q9BWW7 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SCRT1Q9BWW7 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SCRT1Q9BWW7 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
SCRT1Q9BWW7 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
SCRT1Q9BWW7 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
SCRT1Q9BWW7 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
SCRT1Q9BWW7 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
SCRT1Q9BWW7 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.56
SCRT1Q9BWW7 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SCRT1Q9BWW7 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC18.58■□□□□ 0.56
SCRT1Q9BWW7 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC18.58■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms