Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC19.01■□□□□ 0.63
ZNF48Q96MX3 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
ZNF48Q96MX3 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
ZNF48Q96MX3 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
ZNF48Q96MX3 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC19■□□□□ 0.63
ZNF48Q96MX3 TK2-202ENST00000417693 1046 ntTSL 2 BASIC19■□□□□ 0.63
ZNF48Q96MX3 RPP21-222ENST00000433076 577 ntTSL 2 BASIC19■□□□□ 0.63
ZNF48Q96MX3 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC19■□□□□ 0.63
ZNF48Q96MX3 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC19■□□□□ 0.63
ZNF48Q96MX3 AL117332.1-201ENST00000622628 974 ntBASIC19■□□□□ 0.63
ZNF48Q96MX3 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC19■□□□□ 0.63
ZNF48Q96MX3 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC19■□□□□ 0.63
ZNF48Q96MX3 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC19■□□□□ 0.63
ZNF48Q96MX3 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
ZNF48Q96MX3 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
ZNF48Q96MX3 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
ZNF48Q96MX3 LSM4-201ENST00000252816 986 ntTSL 2 BASIC18.99■□□□□ 0.63
ZNF48Q96MX3 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC18.99■□□□□ 0.63
ZNF48Q96MX3 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
ZNF48Q96MX3 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC18.99■□□□□ 0.63
ZNF48Q96MX3 MTDHP2-201ENST00000601468 714 ntBASIC18.99■□□□□ 0.63
ZNF48Q96MX3 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC18.99■□□□□ 0.63
ZNF48Q96MX3 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
ZNF48Q96MX3 FOXO3B-201ENST00000395675 1928 ntBASIC18.98■□□□□ 0.63
ZNF48Q96MX3 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC18.98■□□□□ 0.63
ZNF48Q96MX3 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC18.98■□□□□ 0.63
ZNF48Q96MX3 SSSCA1-AS1-201ENST00000567594 614 ntBASIC18.98■□□□□ 0.63
ZNF48Q96MX3 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC18.98■□□□□ 0.63
ZNF48Q96MX3 MIR6724-1-201ENST00000616420 92 ntBASIC18.98■□□□□ 0.63
ZNF48Q96MX3 MIR6724-2-201ENST00000616483 92 ntBASIC18.98■□□□□ 0.63
ZNF48Q96MX3 MIR6724-4-201ENST00000617390 92 ntBASIC18.98■□□□□ 0.63
ZNF48Q96MX3 MIR6724-3-201ENST00000622482 92 ntBASIC18.98■□□□□ 0.63
ZNF48Q96MX3 AC010501.1-201ENST00000606270 1962 ntBASIC18.98■□□□□ 0.63
ZNF48Q96MX3 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ZNF48Q96MX3 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
ZNF48Q96MX3 AF131216.4-201ENST00000638924 1588 ntBASIC18.98■□□□□ 0.63
ZNF48Q96MX3 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
ZNF48Q96MX3 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
ZNF48Q96MX3 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC18.97■□□□□ 0.63
ZNF48Q96MX3 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ZNF48Q96MX3 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ZNF48Q96MX3 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ZNF48Q96MX3 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC18.97■□□□□ 0.63
ZNF48Q96MX3 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
ZNF48Q96MX3 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
ZNF48Q96MX3 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ZNF48Q96MX3 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
ZNF48Q96MX3 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ZNF48Q96MX3 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC18.96■□□□□ 0.63
ZNF48Q96MX3 MIR3621-201ENST00000580529 85 ntBASIC18.96■□□□□ 0.63
ZNF48Q96MX3 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
ZNF48Q96MX3 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC18.96■□□□□ 0.63
ZNF48Q96MX3 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ZNF48Q96MX3 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ZNF48Q96MX3 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC18.96■□□□□ 0.63
ZNF48Q96MX3 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
ZNF48Q96MX3 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
ZNF48Q96MX3 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
ZNF48Q96MX3 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC18.95■□□□□ 0.62
ZNF48Q96MX3 AL136116.3-201ENST00000402907 1138 ntBASIC18.95■□□□□ 0.62
ZNF48Q96MX3 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ZNF48Q96MX3 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
ZNF48Q96MX3 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ZNF48Q96MX3 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC18.95■□□□□ 0.62
ZNF48Q96MX3 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ZNF48Q96MX3 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
ZNF48Q96MX3 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ZNF48Q96MX3 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ZNF48Q96MX3 MIR638-201ENST00000385237 100 ntBASIC18.94■□□□□ 0.62
ZNF48Q96MX3 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
ZNF48Q96MX3 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ZNF48Q96MX3 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC18.94■□□□□ 0.62
ZNF48Q96MX3 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC18.94■□□□□ 0.62
ZNF48Q96MX3 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC18.94■□□□□ 0.62
ZNF48Q96MX3 CLTA-210ENST00000540080 989 ntTSL 2 BASIC18.94■□□□□ 0.62
ZNF48Q96MX3 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC18.94■□□□□ 0.62
ZNF48Q96MX3 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC18.94■□□□□ 0.62
ZNF48Q96MX3 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ZNF48Q96MX3 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC18.93■□□□□ 0.62
ZNF48Q96MX3 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ZNF48Q96MX3 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ZNF48Q96MX3 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC18.93■□□□□ 0.62
ZNF48Q96MX3 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ZNF48Q96MX3 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
ZNF48Q96MX3 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ZNF48Q96MX3 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ZNF48Q96MX3 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
ZNF48Q96MX3 NALT1-201ENST00000429224 738 ntTSL 5 BASIC18.93■□□□□ 0.62
ZNF48Q96MX3 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ZNF48Q96MX3 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC18.93■□□□□ 0.62
ZNF48Q96MX3 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
ZNF48Q96MX3 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
ZNF48Q96MX3 EXOG-217ENST00000630638 197 ntTSL 5 BASIC18.93■□□□□ 0.62
ZNF48Q96MX3 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ZNF48Q96MX3 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC18.93■□□□□ 0.62
ZNF48Q96MX3 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
ZNF48Q96MX3 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
ZNF48Q96MX3 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ZNF48Q96MX3 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
ZNF48Q96MX3 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms