Protein–RNA interactions for Protein: Q8NEP3

DNAAF1, Dynein assembly factor 1, axonemal, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF1Q8NEP3 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC20.43■□□□□ 0.86
DNAAF1Q8NEP3 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
DNAAF1Q8NEP3 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
DNAAF1Q8NEP3 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
DNAAF1Q8NEP3 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
DNAAF1Q8NEP3 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC20.43■□□□□ 0.86
DNAAF1Q8NEP3 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC20.43■□□□□ 0.86
DNAAF1Q8NEP3 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
DNAAF1Q8NEP3 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC20.43■□□□□ 0.86
DNAAF1Q8NEP3 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
DNAAF1Q8NEP3 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC20.43■□□□□ 0.86
DNAAF1Q8NEP3 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC20.43■□□□□ 0.86
DNAAF1Q8NEP3 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
DNAAF1Q8NEP3 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
DNAAF1Q8NEP3 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
DNAAF1Q8NEP3 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC20.42■□□□□ 0.86
DNAAF1Q8NEP3 AC022413.1-201ENST00000624602 984 ntBASIC20.42■□□□□ 0.86
DNAAF1Q8NEP3 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
DNAAF1Q8NEP3 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
DNAAF1Q8NEP3 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC20.42■□□□□ 0.86
DNAAF1Q8NEP3 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
DNAAF1Q8NEP3 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC20.41■□□□□ 0.86
DNAAF1Q8NEP3 ABCB10P4-201ENST00000566803 2184 ntBASIC20.41■□□□□ 0.86
DNAAF1Q8NEP3 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC20.41■□□□□ 0.86
DNAAF1Q8NEP3 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
DNAAF1Q8NEP3 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC20.41■□□□□ 0.86
DNAAF1Q8NEP3 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
DNAAF1Q8NEP3 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC20.41■□□□□ 0.86
DNAAF1Q8NEP3 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
DNAAF1Q8NEP3 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC20.41■□□□□ 0.86
DNAAF1Q8NEP3 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.4■□□□□ 0.86
DNAAF1Q8NEP3 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
DNAAF1Q8NEP3 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
DNAAF1Q8NEP3 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC20.4■□□□□ 0.86
DNAAF1Q8NEP3 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
DNAAF1Q8NEP3 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
DNAAF1Q8NEP3 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
DNAAF1Q8NEP3 RP9P-202ENST00000450133 1212 ntBASIC20.39■□□□□ 0.85
DNAAF1Q8NEP3 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
DNAAF1Q8NEP3 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC20.39■□□□□ 0.85
DNAAF1Q8NEP3 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
DNAAF1Q8NEP3 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
DNAAF1Q8NEP3 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC20.38■□□□□ 0.85
DNAAF1Q8NEP3 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
DNAAF1Q8NEP3 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC20.38■□□□□ 0.85
DNAAF1Q8NEP3 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
DNAAF1Q8NEP3 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
DNAAF1Q8NEP3 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
DNAAF1Q8NEP3 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
DNAAF1Q8NEP3 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC20.37■□□□□ 0.85
DNAAF1Q8NEP3 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
DNAAF1Q8NEP3 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
DNAAF1Q8NEP3 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
DNAAF1Q8NEP3 HES4-202ENST00000428771 1040 ntTSL 2 BASIC20.37■□□□□ 0.85
DNAAF1Q8NEP3 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
DNAAF1Q8NEP3 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
DNAAF1Q8NEP3 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
DNAAF1Q8NEP3 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
DNAAF1Q8NEP3 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
DNAAF1Q8NEP3 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
DNAAF1Q8NEP3 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
DNAAF1Q8NEP3 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
DNAAF1Q8NEP3 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC20.35■□□□□ 0.85
DNAAF1Q8NEP3 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
DNAAF1Q8NEP3 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
DNAAF1Q8NEP3 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC20.35■□□□□ 0.85
DNAAF1Q8NEP3 DUSP8P5-201ENST00000422884 1815 ntBASIC20.35■□□□□ 0.85
DNAAF1Q8NEP3 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
DNAAF1Q8NEP3 CEP120-209ENST00000515110 606 ntTSL 3 BASIC20.35■□□□□ 0.85
DNAAF1Q8NEP3 MIR4449-201ENST00000578365 66 ntBASIC20.35■□□□□ 0.85
DNAAF1Q8NEP3 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
DNAAF1Q8NEP3 LSR-205ENST00000427250 1606 ntTSL 2 BASIC20.35■□□□□ 0.85
DNAAF1Q8NEP3 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
DNAAF1Q8NEP3 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC20.34■□□□□ 0.85
DNAAF1Q8NEP3 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
DNAAF1Q8NEP3 AC093536.1-201ENST00000569153 554 ntBASIC20.34■□□□□ 0.85
DNAAF1Q8NEP3 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
DNAAF1Q8NEP3 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
DNAAF1Q8NEP3 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
DNAAF1Q8NEP3 ME2-208ENST00000638937 2471 ntTSL 5 BASIC20.34■□□□□ 0.85
DNAAF1Q8NEP3 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC20.34■□□□□ 0.85
DNAAF1Q8NEP3 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
DNAAF1Q8NEP3 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC20.34■□□□□ 0.85
DNAAF1Q8NEP3 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
DNAAF1Q8NEP3 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
DNAAF1Q8NEP3 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
DNAAF1Q8NEP3 GFER-205ENST00000569451 517 ntTSL 5 BASIC20.33■□□□□ 0.85
DNAAF1Q8NEP3 AC007029.1-201ENST00000604183 313 ntBASIC20.33■□□□□ 0.85
DNAAF1Q8NEP3 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
DNAAF1Q8NEP3 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
DNAAF1Q8NEP3 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
DNAAF1Q8NEP3 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
DNAAF1Q8NEP3 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
DNAAF1Q8NEP3 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
DNAAF1Q8NEP3 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC20.32■□□□□ 0.84
DNAAF1Q8NEP3 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
DNAAF1Q8NEP3 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
DNAAF1Q8NEP3 C9orf163-202ENST00000624034 2573 ntBASIC20.31■□□□□ 0.84
DNAAF1Q8NEP3 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
DNAAF1Q8NEP3 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms