Protein–RNA interactions for Protein: Q8N228

SCML4, Sex comb on midleg-like protein 4, humanhuman

Predictions only

Length 414 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCML4Q8N228 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC24.44■■□□□ 1.5
SCML4Q8N228 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC24.44■■□□□ 1.5
SCML4Q8N228 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC24.44■■□□□ 1.5
SCML4Q8N228 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC24.44■■□□□ 1.5
SCML4Q8N228 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
SCML4Q8N228 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
SCML4Q8N228 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC24.43■■□□□ 1.5
SCML4Q8N228 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
SCML4Q8N228 AC021242.3-201ENST00000607598 1377 ntBASIC24.43■■□□□ 1.5
SCML4Q8N228 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
SCML4Q8N228 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
SCML4Q8N228 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC24.43■■□□□ 1.5
SCML4Q8N228 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC24.43■■□□□ 1.5
SCML4Q8N228 BX664725.1-201ENST00000438252 379 ntBASIC24.43■■□□□ 1.5
SCML4Q8N228 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC24.43■■□□□ 1.5
SCML4Q8N228 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC24.43■■□□□ 1.5
SCML4Q8N228 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
SCML4Q8N228 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC24.42■■□□□ 1.5
SCML4Q8N228 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC24.42■■□□□ 1.5
SCML4Q8N228 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
SCML4Q8N228 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
SCML4Q8N228 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
SCML4Q8N228 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
SCML4Q8N228 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
SCML4Q8N228 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
SCML4Q8N228 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC24.41■■□□□ 1.5
SCML4Q8N228 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC24.41■■□□□ 1.5
SCML4Q8N228 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
SCML4Q8N228 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
SCML4Q8N228 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
SCML4Q8N228 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC24.4■■□□□ 1.5
SCML4Q8N228 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC24.4■■□□□ 1.5
SCML4Q8N228 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC24.4■■□□□ 1.5
SCML4Q8N228 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
SCML4Q8N228 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
SCML4Q8N228 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
SCML4Q8N228 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC24.39■■□□□ 1.49
SCML4Q8N228 HES6-204ENST00000409182 863 ntTSL 2 BASIC24.39■■□□□ 1.49
SCML4Q8N228 TRIR-205ENST00000592273 783 ntTSL 3 BASIC24.39■■□□□ 1.49
SCML4Q8N228 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC24.39■■□□□ 1.49
SCML4Q8N228 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC24.39■■□□□ 1.49
SCML4Q8N228 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC24.39■■□□□ 1.49
SCML4Q8N228 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
SCML4Q8N228 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
SCML4Q8N228 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
SCML4Q8N228 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
SCML4Q8N228 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
SCML4Q8N228 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC24.38■■□□□ 1.49
SCML4Q8N228 MED17-227ENST00000640521 2047 ntTSL 5 BASIC24.38■■□□□ 1.49
SCML4Q8N228 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC24.38■■□□□ 1.49
SCML4Q8N228 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC24.38■■□□□ 1.49
SCML4Q8N228 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
SCML4Q8N228 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
SCML4Q8N228 LBH-205ENST00000407930 756 ntTSL 2 BASIC24.37■■□□□ 1.49
SCML4Q8N228 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC24.37■■□□□ 1.49
SCML4Q8N228 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC24.37■■□□□ 1.49
SCML4Q8N228 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
SCML4Q8N228 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC24.37■■□□□ 1.49
SCML4Q8N228 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC24.37■■□□□ 1.49
SCML4Q8N228 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
SCML4Q8N228 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC24.36■■□□□ 1.49
SCML4Q8N228 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
SCML4Q8N228 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
SCML4Q8N228 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
SCML4Q8N228 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC24.36■■□□□ 1.49
SCML4Q8N228 AC239859.2-201ENST00000444165 318 ntBASIC24.36■■□□□ 1.49
SCML4Q8N228 OR2A1-AS1-204ENST00000470435 602 ntBASIC24.36■■□□□ 1.49
SCML4Q8N228 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
SCML4Q8N228 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC24.36■■□□□ 1.49
SCML4Q8N228 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
SCML4Q8N228 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC24.36■■□□□ 1.49
SCML4Q8N228 AC138932.3-201ENST00000567634 1902 ntBASIC24.35■■□□□ 1.49
SCML4Q8N228 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
SCML4Q8N228 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC24.35■■□□□ 1.49
SCML4Q8N228 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
SCML4Q8N228 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC24.35■■□□□ 1.49
SCML4Q8N228 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC24.35■■□□□ 1.49
SCML4Q8N228 KRT125P-201ENST00000546827 989 ntBASIC24.35■■□□□ 1.49
SCML4Q8N228 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
SCML4Q8N228 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC24.34■■□□□ 1.49
SCML4Q8N228 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC24.34■■□□□ 1.49
SCML4Q8N228 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC24.34■■□□□ 1.49
SCML4Q8N228 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
SCML4Q8N228 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
SCML4Q8N228 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC24.33■■□□□ 1.49
SCML4Q8N228 TK2-202ENST00000417693 1046 ntTSL 2 BASIC24.33■■□□□ 1.49
SCML4Q8N228 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC24.33■■□□□ 1.49
SCML4Q8N228 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC24.33■■□□□ 1.49
SCML4Q8N228 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC24.33■■□□□ 1.48
SCML4Q8N228 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC24.33■■□□□ 1.48
SCML4Q8N228 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC24.32■■□□□ 1.48
SCML4Q8N228 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
SCML4Q8N228 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC24.32■■□□□ 1.48
SCML4Q8N228 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC24.32■■□□□ 1.48
SCML4Q8N228 GUSBP5-201ENST00000418136 578 ntBASIC24.32■■□□□ 1.48
SCML4Q8N228 SENP5-202ENST00000419026 973 ntTSL 3 BASIC24.32■■□□□ 1.48
SCML4Q8N228 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC24.32■■□□□ 1.48
SCML4Q8N228 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC24.32■■□□□ 1.48
SCML4Q8N228 MIR4787-201ENST00000607364 84 ntBASIC24.32■■□□□ 1.48
SCML4Q8N228 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms