Protein–RNA interactions for Protein: Q7Z3J3

RGPD4, RanBP2-like and GRIP domain-containing protein 4, humanhuman

Predictions only

Length 1,758 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD4Q7Z3J3 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
RGPD4Q7Z3J3 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC30.34■■■□□ 2.45
RGPD4Q7Z3J3 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC30.34■■■□□ 2.45
RGPD4Q7Z3J3 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
RGPD4Q7Z3J3 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC30.33■■■□□ 2.45
RGPD4Q7Z3J3 ID1-201ENST00000376105 1233 ntBASIC30.33■■■□□ 2.45
RGPD4Q7Z3J3 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC30.33■■■□□ 2.45
RGPD4Q7Z3J3 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
RGPD4Q7Z3J3 SERBP1P1-201ENST00000396021 1160 ntBASIC30.33■■■□□ 2.45
RGPD4Q7Z3J3 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC30.33■■■□□ 2.45
RGPD4Q7Z3J3 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.45
RGPD4Q7Z3J3 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC30.32■■■□□ 2.44
RGPD4Q7Z3J3 AC099791.1-201ENST00000416440 715 ntBASIC30.32■■■□□ 2.44
RGPD4Q7Z3J3 SLC47A1P1-202ENST00000449666 945 ntBASIC30.32■■■□□ 2.44
RGPD4Q7Z3J3 SYT6-210ENST00000641643 1587 ntBASIC30.32■■■□□ 2.44
RGPD4Q7Z3J3 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC30.31■■■□□ 2.44
RGPD4Q7Z3J3 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
RGPD4Q7Z3J3 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
RGPD4Q7Z3J3 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
RGPD4Q7Z3J3 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
RGPD4Q7Z3J3 AC022517.1-201ENST00000592429 346 ntBASIC30.31■■■□□ 2.44
RGPD4Q7Z3J3 SP2-202ENST00000613139 908 ntTSL 5 BASIC30.31■■■□□ 2.44
RGPD4Q7Z3J3 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
RGPD4Q7Z3J3 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC30.3■■■□□ 2.44
RGPD4Q7Z3J3 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
RGPD4Q7Z3J3 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
RGPD4Q7Z3J3 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC30.29■■■□□ 2.44
RGPD4Q7Z3J3 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
RGPD4Q7Z3J3 AC092171.4-201ENST00000609130 632 ntBASIC30.29■■■□□ 2.44
RGPD4Q7Z3J3 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC30.28■■■□□ 2.44
RGPD4Q7Z3J3 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC30.28■■■□□ 2.44
RGPD4Q7Z3J3 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC30.28■■■□□ 2.44
RGPD4Q7Z3J3 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC30.28■■■□□ 2.44
RGPD4Q7Z3J3 AL138724.1-201ENST00000606771 1088 ntBASIC30.28■■■□□ 2.44
RGPD4Q7Z3J3 AK1-201ENST00000223836 736 ntTSL 3 BASIC30.27■■■□□ 2.44
RGPD4Q7Z3J3 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
RGPD4Q7Z3J3 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC30.27■■■□□ 2.44
RGPD4Q7Z3J3 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC30.26■■■□□ 2.44
RGPD4Q7Z3J3 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.44
RGPD4Q7Z3J3 LBH-205ENST00000407930 756 ntTSL 2 BASIC30.26■■■□□ 2.44
RGPD4Q7Z3J3 AL031602.1-201ENST00000633169 911 ntBASIC30.26■■■□□ 2.44
RGPD4Q7Z3J3 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC30.26■■■□□ 2.43
RGPD4Q7Z3J3 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
RGPD4Q7Z3J3 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
RGPD4Q7Z3J3 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC30.25■■■□□ 2.43
RGPD4Q7Z3J3 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
RGPD4Q7Z3J3 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC30.25■■■□□ 2.43
RGPD4Q7Z3J3 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC30.25■■■□□ 2.43
RGPD4Q7Z3J3 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
RGPD4Q7Z3J3 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC30.24■■■□□ 2.43
RGPD4Q7Z3J3 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
RGPD4Q7Z3J3 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
RGPD4Q7Z3J3 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC30.23■■■□□ 2.43
RGPD4Q7Z3J3 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC30.23■■■□□ 2.43
RGPD4Q7Z3J3 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
RGPD4Q7Z3J3 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC30.23■■■□□ 2.43
RGPD4Q7Z3J3 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC30.23■■■□□ 2.43
RGPD4Q7Z3J3 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
RGPD4Q7Z3J3 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
RGPD4Q7Z3J3 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC30.22■■■□□ 2.43
RGPD4Q7Z3J3 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
RGPD4Q7Z3J3 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC30.22■■■□□ 2.43
RGPD4Q7Z3J3 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC30.22■■■□□ 2.43
RGPD4Q7Z3J3 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC30.22■■■□□ 2.43
RGPD4Q7Z3J3 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC30.22■■■□□ 2.43
RGPD4Q7Z3J3 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC30.21■■■□□ 2.43
RGPD4Q7Z3J3 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
RGPD4Q7Z3J3 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC30.21■■■□□ 2.43
RGPD4Q7Z3J3 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC30.21■■■□□ 2.43
RGPD4Q7Z3J3 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC30.21■■■□□ 2.43
RGPD4Q7Z3J3 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC30.21■■■□□ 2.43
RGPD4Q7Z3J3 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
RGPD4Q7Z3J3 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC30.2■■■□□ 2.43
RGPD4Q7Z3J3 DUX4L2-201ENST00000561772 1275 ntBASIC30.2■■■□□ 2.43
RGPD4Q7Z3J3 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC30.2■■■□□ 2.43
RGPD4Q7Z3J3 DUX4L6-201ENST00000626483 1275 ntBASIC30.2■■■□□ 2.43
RGPD4Q7Z3J3 DUX4L1-201ENST00000627662 1275 ntBASIC30.2■■■□□ 2.43
RGPD4Q7Z3J3 DUX4L8-201ENST00000629013 1275 ntBASIC30.2■■■□□ 2.43
RGPD4Q7Z3J3 DUX4L3-201ENST00000630187 1275 ntBASIC30.2■■■□□ 2.43
RGPD4Q7Z3J3 DUX4L7-201ENST00000630678 1275 ntBASIC30.2■■■□□ 2.43
RGPD4Q7Z3J3 DUX4L5-201ENST00000630834 1275 ntBASIC30.2■■■□□ 2.43
RGPD4Q7Z3J3 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
RGPD4Q7Z3J3 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC30.2■■■□□ 2.42
RGPD4Q7Z3J3 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC30.2■■■□□ 2.42
RGPD4Q7Z3J3 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC30.2■■■□□ 2.42
RGPD4Q7Z3J3 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC30.2■■■□□ 2.42
RGPD4Q7Z3J3 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC30.2■■■□□ 2.42
RGPD4Q7Z3J3 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
RGPD4Q7Z3J3 FOXO3B-201ENST00000395675 1928 ntBASIC30.19■■■□□ 2.42
RGPD4Q7Z3J3 AC027612.3-201ENST00000413684 1047 ntBASIC30.19■■■□□ 2.42
RGPD4Q7Z3J3 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
RGPD4Q7Z3J3 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC30.19■■■□□ 2.42
RGPD4Q7Z3J3 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC30.19■■■□□ 2.42
RGPD4Q7Z3J3 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
RGPD4Q7Z3J3 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC30.18■■■□□ 2.42
RGPD4Q7Z3J3 AC008764.7-201ENST00000593779 1081 ntBASIC30.18■■■□□ 2.42
RGPD4Q7Z3J3 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
RGPD4Q7Z3J3 YBX1P1-201ENST00000445822 960 ntBASIC30.18■■■□□ 2.42
RGPD4Q7Z3J3 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC30.17■■■□□ 2.42
RGPD4Q7Z3J3 DRD5P2-201ENST00000421395 2012 ntBASIC30.17■■■□□ 2.42
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms