Protein–RNA interactions for Protein: Q7RTT4

SSX8, Protein SSX8, humanhuman

Predictions only

Length 187 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX8Q7RTT4 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC20.27■□□□□ 0.83
SSX8Q7RTT4 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
SSX8Q7RTT4 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.83
SSX8Q7RTT4 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
SSX8Q7RTT4 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
SSX8Q7RTT4 MIR6089-201ENST00000616698 64 ntBASIC20.26■□□□□ 0.83
SSX8Q7RTT4 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC20.26■□□□□ 0.83
SSX8Q7RTT4 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC20.26■□□□□ 0.83
SSX8Q7RTT4 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
SSX8Q7RTT4 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SSX8Q7RTT4 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SSX8Q7RTT4 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC20.26■□□□□ 0.83
SSX8Q7RTT4 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SSX8Q7RTT4 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC20.25■□□□□ 0.83
SSX8Q7RTT4 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SSX8Q7RTT4 SENP5-202ENST00000419026 973 ntTSL 3 BASIC20.25■□□□□ 0.83
SSX8Q7RTT4 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC20.25■□□□□ 0.83
SSX8Q7RTT4 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC20.25■□□□□ 0.83
SSX8Q7RTT4 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC20.25■□□□□ 0.83
SSX8Q7RTT4 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC20.25■□□□□ 0.83
SSX8Q7RTT4 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SSX8Q7RTT4 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SSX8Q7RTT4 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SSX8Q7RTT4 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SSX8Q7RTT4 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
SSX8Q7RTT4 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SSX8Q7RTT4 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
SSX8Q7RTT4 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC20.24■□□□□ 0.83
SSX8Q7RTT4 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC20.24■□□□□ 0.83
SSX8Q7RTT4 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC20.24■□□□□ 0.83
SSX8Q7RTT4 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SSX8Q7RTT4 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC20.24■□□□□ 0.83
SSX8Q7RTT4 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC20.24■□□□□ 0.83
SSX8Q7RTT4 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SSX8Q7RTT4 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SSX8Q7RTT4 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SSX8Q7RTT4 STK32C-205ENST00000456004 607 ntTSL 2 BASIC20.23■□□□□ 0.83
SSX8Q7RTT4 AL356740.2-201ENST00000601559 647 ntBASIC20.23■□□□□ 0.83
SSX8Q7RTT4 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC20.23■□□□□ 0.83
SSX8Q7RTT4 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC20.23■□□□□ 0.83
SSX8Q7RTT4 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SSX8Q7RTT4 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SSX8Q7RTT4 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SSX8Q7RTT4 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
SSX8Q7RTT4 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SSX8Q7RTT4 AC091060.1-201ENST00000623524 1766 ntBASIC20.22■□□□□ 0.83
SSX8Q7RTT4 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
SSX8Q7RTT4 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SSX8Q7RTT4 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC20.22■□□□□ 0.83
SSX8Q7RTT4 CLTA-210ENST00000540080 989 ntTSL 2 BASIC20.22■□□□□ 0.83
SSX8Q7RTT4 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC20.22■□□□□ 0.83
SSX8Q7RTT4 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC20.22■□□□□ 0.83
SSX8Q7RTT4 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SSX8Q7RTT4 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
SSX8Q7RTT4 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
SSX8Q7RTT4 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
SSX8Q7RTT4 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC20.21■□□□□ 0.83
SSX8Q7RTT4 SNX5-217ENST00000606557 1087 ntBASIC20.21■□□□□ 0.83
SSX8Q7RTT4 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC20.21■□□□□ 0.83
SSX8Q7RTT4 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC20.21■□□□□ 0.83
SSX8Q7RTT4 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SSX8Q7RTT4 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SSX8Q7RTT4 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC20.2■□□□□ 0.82
SSX8Q7RTT4 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC20.2■□□□□ 0.82
SSX8Q7RTT4 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC20.2■□□□□ 0.82
SSX8Q7RTT4 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC20.2■□□□□ 0.82
SSX8Q7RTT4 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC20.2■□□□□ 0.82
SSX8Q7RTT4 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC20.2■□□□□ 0.82
SSX8Q7RTT4 AL161729.1-201ENST00000604104 1402 ntBASIC20.19■□□□□ 0.82
SSX8Q7RTT4 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SSX8Q7RTT4 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC20.19■□□□□ 0.82
SSX8Q7RTT4 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
SSX8Q7RTT4 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
SSX8Q7RTT4 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC20.19■□□□□ 0.82
SSX8Q7RTT4 AC008406.3-201ENST00000620001 1374 ntBASIC20.19■□□□□ 0.82
SSX8Q7RTT4 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SSX8Q7RTT4 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SSX8Q7RTT4 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SSX8Q7RTT4 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
SSX8Q7RTT4 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SSX8Q7RTT4 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SSX8Q7RTT4 TFPT-201ENST00000391757 774 ntTSL 5 BASIC20.18■□□□□ 0.82
SSX8Q7RTT4 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
SSX8Q7RTT4 AC004448.1-201ENST00000458332 883 ntBASIC20.18■□□□□ 0.82
SSX8Q7RTT4 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
SSX8Q7RTT4 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC20.18■□□□□ 0.82
SSX8Q7RTT4 MIR3621-201ENST00000580529 85 ntBASIC20.18■□□□□ 0.82
SSX8Q7RTT4 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SSX8Q7RTT4 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC20.18■□□□□ 0.82
SSX8Q7RTT4 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC20.18■□□□□ 0.82
SSX8Q7RTT4 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
SSX8Q7RTT4 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC20.18■□□□□ 0.82
SSX8Q7RTT4 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC20.18■□□□□ 0.82
SSX8Q7RTT4 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SSX8Q7RTT4 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC20.17■□□□□ 0.82
SSX8Q7RTT4 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SSX8Q7RTT4 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC20.17■□□□□ 0.82
SSX8Q7RTT4 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC20.17■□□□□ 0.82
SSX8Q7RTT4 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
SSX8Q7RTT4 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 77.9 ms