Protein–RNA interactions for Protein: Q01477

UBP3, Ubiquitin carboxyl-terminal hydrolase 3, yeastyeast

Known RBP RIP-Chip data

Length 912 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UBP3Q01477 YJR084WYJR084W 1272 nt6.69□□□□□ -1.34
UBP3Q01477 AIM33YML087C 939 nt6.69□□□□□ -1.34
UBP3Q01477 IRC14YOR135C 342 nt6.69□□□□□ -1.34
UBP3Q01477 FOB1YDR110W 1701 nt6.69□□□□□ -1.34
UBP3Q01477 PGM1YKL127W 1713 nt6.69□□□□□ -1.34
UBP3Q01477 SET4YJL105W 1683 nt6.68□□□□□ -1.34
UBP3Q01477 GSH2YOL049W 1476 nt6.68□□□□□ -1.34
UBP3Q01477 ERC1YHR032W 1746 nt6.68□□□□□ -1.34
UBP3Q01477 COA1YIL157C 594 nt6.68□□□□□ -1.34
UBP3Q01477 YNL143CYNL143C 393 nt6.68□□□□□ -1.34
UBP3Q01477 SSU72YNL222W 621 nt6.68□□□□□ -1.34
UBP3Q01477 YOL050CYOL050C 321 nt6.68□□□□□ -1.34
UBP3Q01477 PHO3YBR092C 1404 nt6.67□□□□□ -1.34
UBP3Q01477 HVG1YER039C 750 nt6.67□□□□□ -1.34 RIP-Chip
UBP3Q01477 ARI1YGL157W 1044 nt6.67□□□□□ -1.34
UBP3Q01477 YNL226WYNL226W 411 nt6.67□□□□□ -1.34
UBP3Q01477 MRPL10YNL284C 969 nt6.67□□□□□ -1.34
UBP3Q01477 YTP1YNL237W 1380 nt6.67□□□□□ -1.34
UBP3Q01477 NTE1YML059C 5040 nt6.66□□□□□ -1.34
UBP3Q01477 YGL101WYGL101W 648 nt6.66□□□□□ -1.34
UBP3Q01477 CTL1YMR180C 963 nt6.66□□□□□ -1.34
UBP3Q01477 SCS7YMR272C 1155 nt6.66□□□□□ -1.34 RIP-Chip
UBP3Q01477 YNL108CYNL108C 813 nt6.66□□□□□ -1.34
UBP3Q01477 YOR289WYOR289W 756 nt6.66□□□□□ -1.34 RIP-Chip
UBP3Q01477 RRS1YOR294W 612 nt6.66□□□□□ -1.34
UBP3Q01477 ILV1YER086W 1731 nt6.66□□□□□ -1.34 RIP-Chip
UBP3Q01477 MAL13YGR288W 1422 nt6.66□□□□□ -1.34
UBP3Q01477 APE1YKL103C 1545 nt6.66□□□□□ -1.34
UBP3Q01477 PYC2YBR218C 3543 nt6.65□□□□□ -1.34
UBP3Q01477 YCR016WYCR016W 873 nt6.65□□□□□ -1.34
UBP3Q01477 DUO1YGL061C 744 nt6.65□□□□□ -1.34
UBP3Q01477 RPF2YKR081C 1035 nt6.65□□□□□ -1.34
UBP3Q01477 AAT2YLR027C 1257 nt6.65□□□□□ -1.34
UBP3Q01477 YMR030W-AYMR030W-A 291 nt6.65□□□□□ -1.34
UBP3Q01477 CSG2YBR036C 1233 nt6.65□□□□□ -1.34
UBP3Q01477 YMC1YPR058W 924 nt6.65□□□□□ -1.34 RIP-Chip
UBP3Q01477 DSF1YEL070W 1509 nt6.65□□□□□ -1.35
UBP3Q01477 YNR073CYNR073C 1509 nt6.65□□□□□ -1.35
UBP3Q01477 NSI1YDR026C 1713 nt6.64□□□□□ -1.35
UBP3Q01477 DMA1YHR115C 1251 nt6.64□□□□□ -1.35
UBP3Q01477 CCP1YKR066C 1086 nt6.64□□□□□ -1.35 RIP-Chip
UBP3Q01477 YBL029C-AYBL029C-A 285 nt6.64□□□□□ -1.35
UBP3Q01477 BSC4YNL269W 396 nt6.64□□□□□ -1.35
UBP3Q01477 COR1YBL045C 1374 nt6.64□□□□□ -1.35
UBP3Q01477 OMS1YDR316W 1416 nt6.64□□□□□ -1.35
UBP3Q01477 ERG1YGR175C 1491 nt6.64□□□□□ -1.35
UBP3Q01477 FKH1YIL131C 1455 nt6.64□□□□□ -1.35
UBP3Q01477 VHT1YGR065C 1782 nt6.64□□□□□ -1.35
UBP3Q01477 MOB2YFL034C-B 864 nt6.63□□□□□ -1.35
UBP3Q01477 SAY1YGR263C 1275 nt6.63□□□□□ -1.35 RIP-Chip
UBP3Q01477 SPC97YHR172W 2472 nt6.63□□□□□ -1.35
UBP3Q01477 POP5YAL033W 522 nt6.63□□□□□ -1.35
UBP3Q01477 UIP3YAR027W 708 nt6.63□□□□□ -1.35
UBP3Q01477 RAP1YNL216W 2484 nt6.62□□□□□ -1.35
UBP3Q01477 HXT7YDR342C 1713 nt6.62□□□□□ -1.35
UBP3Q01477 HXT6YDR343C 1713 nt6.62□□□□□ -1.35 RIP-Chip
UBP3Q01477 FYV1YDR024W 486 nt6.62□□□□□ -1.35
UBP3Q01477 VPS61YDR136C 573 nt6.62□□□□□ -1.35
UBP3Q01477 COX20YDR231C 618 nt6.62□□□□□ -1.35
UBP3Q01477 YDR278CYDR278C 318 nt6.62□□□□□ -1.35
UBP3Q01477 YDR336WYDR336W 945 nt6.62□□□□□ -1.35
UBP3Q01477 RPL12AYEL054C 498 nt6.62□□□□□ -1.35
UBP3Q01477 YMR086C-AYMR086C-A 339 nt6.62□□□□□ -1.35
UBP3Q01477 PSH1YOL054W 1221 nt6.62□□□□□ -1.35
UBP3Q01477 YCK1YHR135C 1617 nt6.61□□□□□ -1.35 RIP-Chip
UBP3Q01477 GEF1YJR040W 2340 nt6.61□□□□□ -1.35 RIP-Chip
UBP3Q01477 MDM10YAL010C 1482 nt6.61□□□□□ -1.35 RIP-Chip
UBP3Q01477 RIO1YOR119C 1455 nt6.61□□□□□ -1.35
UBP3Q01477 ISC1YER019W 1434 nt6.61□□□□□ -1.35
UBP3Q01477 DUG1YFR044C 1446 nt6.61□□□□□ -1.35
UBP3Q01477 SSK1YLR006C 2139 nt6.61□□□□□ -1.35
UBP3Q01477 VNX1YNL321W 2727 nt6.61□□□□□ -1.35
UBP3Q01477 EXG1YLR300W 1347 nt6.61□□□□□ -1.35 RIP-Chip
UBP3Q01477 YGR168CYGR168C 1131 nt6.61□□□□□ -1.35
UBP3Q01477 SKI6YGR195W 741 nt6.61□□□□□ -1.35
UBP3Q01477 SPG1YGR236C 288 nt6.61□□□□□ -1.35
UBP3Q01477 RPL21AYBR191W 483 nt6.61□□□□□ -1.35 RIP-Chip
UBP3Q01477 NUF2YOL069W 1356 nt6.6□□□□□ -1.35 RIP-Chip
UBP3Q01477 IXR1YKL032C 1794 nt6.6□□□□□ -1.35
UBP3Q01477 MAK31YCR020C-A 267 nt6.6□□□□□ -1.35
UBP3Q01477 DCG1YIR030C 735 nt6.6□□□□□ -1.35
UBP3Q01477 PEX13YLR191W 1161 nt6.6□□□□□ -1.35
UBP3Q01477 FSF1YOR271C 984 nt6.6□□□□□ -1.35
UBP3Q01477 TFB6YOR352W 1032 nt6.6□□□□□ -1.35
UBP3Q01477 CKS1YBR135W 453 nt6.6□□□□□ -1.35
UBP3Q01477 NOP2YNL061W 1857 nt6.6□□□□□ -1.35
UBP3Q01477 SDA1YGR245C 2304 nt6.59□□□□□ -1.35
UBP3Q01477 GRX6YDL010W 696 nt6.59□□□□□ -1.35
UBP3Q01477 DCD1YHR144C 939 nt6.59□□□□□ -1.35
UBP3Q01477 PRE3YJL001W 648 nt6.59□□□□□ -1.35 RIP-Chip
UBP3Q01477 YJR096WYJR096W 849 nt6.59□□□□□ -1.35
UBP3Q01477 PCD1YLR151C 1023 nt6.59□□□□□ -1.35
UBP3Q01477 HCR1YLR192C 798 nt6.59□□□□□ -1.35 RIP-Chip
UBP3Q01477 DUS4YLR405W 1104 nt6.59□□□□□ -1.35
UBP3Q01477 RNH201YNL072W 924 nt6.59□□□□□ -1.35
UBP3Q01477 PCS60YBR222C 1632 nt6.58□□□□□ -1.36
UBP3Q01477 RMD1YDL001W 1293 nt6.58□□□□□ -1.36
UBP3Q01477 YET3YDL072C 612 nt6.58□□□□□ -1.36
UBP3Q01477 YEA4YEL004W 1029 nt6.58□□□□□ -1.36
UBP3Q01477 YLF2YHL014C 1218 nt6.58□□□□□ -1.36
Retrieved 100 of 7,029 protein–RNA pairs in 15.4 ms