Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
CCL20P78556 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
CCL20P78556 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC18.4■□□□□ 0.54
CCL20P78556 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
CCL20P78556 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
CCL20P78556 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
CCL20P78556 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
CCL20P78556 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
CCL20P78556 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC18.39■□□□□ 0.53
CCL20P78556 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC18.39■□□□□ 0.53
CCL20P78556 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC18.39■□□□□ 0.53
CCL20P78556 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC18.39■□□□□ 0.53
CCL20P78556 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CCL20P78556 LINC00526-201ENST00000581067 1875 ntBASIC18.39■□□□□ 0.53
CCL20P78556 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCL20P78556 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCL20P78556 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCL20P78556 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC18.39■□□□□ 0.53
CCL20P78556 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
CCL20P78556 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC18.38■□□□□ 0.53
CCL20P78556 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCL20P78556 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCL20P78556 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CCL20P78556 AC137767.1-201ENST00000602918 1920 ntBASIC18.38■□□□□ 0.53
CCL20P78556 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
CCL20P78556 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCL20P78556 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCL20P78556 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC18.38■□□□□ 0.53
CCL20P78556 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
CCL20P78556 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC18.37■□□□□ 0.53
CCL20P78556 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CCL20P78556 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCL20P78556 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCL20P78556 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC18.37■□□□□ 0.53
CCL20P78556 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CCL20P78556 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCL20P78556 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCL20P78556 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC18.37■□□□□ 0.53
CCL20P78556 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCL20P78556 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCL20P78556 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCL20P78556 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCL20P78556 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCL20P78556 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC18.36■□□□□ 0.53
CCL20P78556 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCL20P78556 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CCL20P78556 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CCL20P78556 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC18.36■□□□□ 0.53
CCL20P78556 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC18.36■□□□□ 0.53
CCL20P78556 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC18.36■□□□□ 0.53
CCL20P78556 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC18.36■□□□□ 0.53
CCL20P78556 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC18.36■□□□□ 0.53
CCL20P78556 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCL20P78556 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
CCL20P78556 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
CCL20P78556 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC18.35■□□□□ 0.53
CCL20P78556 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCL20P78556 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCL20P78556 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCL20P78556 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCL20P78556 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
CCL20P78556 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCL20P78556 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CCL20P78556 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCL20P78556 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCL20P78556 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC18.34■□□□□ 0.53
CCL20P78556 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
CCL20P78556 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC18.34■□□□□ 0.53
CCL20P78556 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCL20P78556 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCL20P78556 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCL20P78556 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCL20P78556 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CCL20P78556 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC18.34■□□□□ 0.53
CCL20P78556 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
CCL20P78556 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC18.34■□□□□ 0.53
CCL20P78556 LSR-205ENST00000427250 1606 ntTSL 2 BASIC18.34■□□□□ 0.53
CCL20P78556 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC18.34■□□□□ 0.53
CCL20P78556 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CCL20P78556 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CCL20P78556 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
CCL20P78556 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CCL20P78556 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CCL20P78556 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CCL20P78556 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CCL20P78556 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCL20P78556 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CCL20P78556 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
CCL20P78556 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCL20P78556 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
CCL20P78556 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
CCL20P78556 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCL20P78556 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CCL20P78556 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CCL20P78556 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCL20P78556 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCL20P78556 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CCL20P78556 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCL20P78556 RPS2-210ENST00000530225 765 ntTSL 2 BASIC18.32■□□□□ 0.52
CCL20P78556 AC005559.1-201ENST00000589661 871 ntBASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms