Protein–RNA interactions for Protein: P34741

SDC2, Syndecan-2, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2P34741 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SDC2P34741 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SDC2P34741 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
SDC2P34741 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
SDC2P34741 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SDC2P34741 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
SDC2P34741 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SDC2P34741 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SDC2P34741 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC20.61■□□□□ 0.89
SDC2P34741 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
SDC2P34741 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC20.6■□□□□ 0.89
SDC2P34741 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC20.6■□□□□ 0.89
SDC2P34741 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SDC2P34741 MIR219A2-201ENST00000608502 1504 ntBASIC20.6■□□□□ 0.89
SDC2P34741 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SDC2P34741 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
SDC2P34741 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SDC2P34741 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SDC2P34741 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
SDC2P34741 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SDC2P34741 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SDC2P34741 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SDC2P34741 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
SDC2P34741 LSR-205ENST00000427250 1606 ntTSL 2 BASIC20.59■□□□□ 0.89
SDC2P34741 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
SDC2P34741 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SDC2P34741 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC20.59■□□□□ 0.89
SDC2P34741 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SDC2P34741 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
SDC2P34741 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SDC2P34741 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SDC2P34741 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
SDC2P34741 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SDC2P34741 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC20.58■□□□□ 0.88
SDC2P34741 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC20.58■□□□□ 0.88
SDC2P34741 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SDC2P34741 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SDC2P34741 AC087741.3-201ENST00000624270 1347 ntBASIC20.57■□□□□ 0.88
SDC2P34741 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC20.57■□□□□ 0.88
SDC2P34741 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SDC2P34741 STK25-234ENST00000535007 2459 ntTSL 2 BASIC20.57■□□□□ 0.88
SDC2P34741 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC20.57■□□□□ 0.88
SDC2P34741 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SDC2P34741 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
SDC2P34741 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SDC2P34741 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SDC2P34741 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
SDC2P34741 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
SDC2P34741 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SDC2P34741 EP400NL-214ENST00000641289 2402 ntBASIC20.56■□□□□ 0.88
SDC2P34741 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
SDC2P34741 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SDC2P34741 AC021231.2-201ENST00000594613 730 ntBASIC20.56■□□□□ 0.88
SDC2P34741 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SDC2P34741 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SDC2P34741 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
SDC2P34741 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
SDC2P34741 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
SDC2P34741 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SDC2P34741 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
SDC2P34741 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC20.55■□□□□ 0.88
SDC2P34741 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.55■□□□□ 0.88
SDC2P34741 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SDC2P34741 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC20.55■□□□□ 0.88
SDC2P34741 AC233723.2-201ENST00000623798 2106 ntBASIC20.55■□□□□ 0.88
SDC2P34741 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC20.55■□□□□ 0.88
SDC2P34741 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC20.55■□□□□ 0.88
SDC2P34741 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC20.55■□□□□ 0.88
SDC2P34741 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SDC2P34741 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SDC2P34741 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC20.54■□□□□ 0.88
SDC2P34741 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SDC2P34741 LINC00565-201ENST00000562710 2331 ntBASIC20.54■□□□□ 0.88
SDC2P34741 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SDC2P34741 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SDC2P34741 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SDC2P34741 MIR6089-201ENST00000616698 64 ntBASIC20.54■□□□□ 0.88
SDC2P34741 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SDC2P34741 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SDC2P34741 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
SDC2P34741 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SDC2P34741 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SDC2P34741 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
SDC2P34741 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
SDC2P34741 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC20.53■□□□□ 0.88
SDC2P34741 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SDC2P34741 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SDC2P34741 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
SDC2P34741 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC20.53■□□□□ 0.88
SDC2P34741 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SDC2P34741 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
SDC2P34741 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
SDC2P34741 AC148477.6-201ENST00000623746 465 ntBASIC20.52■□□□□ 0.88
SDC2P34741 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SDC2P34741 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SDC2P34741 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
SDC2P34741 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
SDC2P34741 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
SDC2P34741 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.87
SDC2P34741 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 15.4 ms