Protein–RNA interactions for Protein: P0CX68

TY1A-LR1, Transposon Ty1-LR1 Gag polyprotein, yeastyeast

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1A-LR1P0CX68 DCN1YLR128W 810 nt7.54□□□□□ -1.2
TY1A-LR1P0CX68 GCD7YLR291C 1146 nt7.54□□□□□ -1.2
TY1A-LR1P0CX68 YLR312CYLR312C 1197 nt7.54□□□□□ -1.2
TY1A-LR1P0CX68 GAB1YLR459W 1185 nt7.54□□□□□ -1.2
TY1A-LR1P0CX68 RAD10YML095C 633 nt7.54□□□□□ -1.2
TY1A-LR1P0CX68 YNR040WYNR040W 771 nt7.54□□□□□ -1.2
TY1A-LR1P0CX68 UAF30YOR295W 687 nt7.54□□□□□ -1.2
TY1A-LR1P0CX68 TPN1YGL186C 1740 nt7.54□□□□□ -1.2
TY1A-LR1P0CX68 MGA1YGR249W 1371 nt7.54□□□□□ -1.2
TY1A-LR1P0CX68 GSH2YOL049W 1476 nt7.54□□□□□ -1.2
TY1A-LR1P0CX68 LAG2YOL025W 1983 nt7.53□□□□□ -1.2
TY1A-LR1P0CX68 YFR009W-AYFR009W-A 258 nt7.53□□□□□ -1.2
TY1A-LR1P0CX68 GPI12YMR281W 915 nt7.53□□□□□ -1.2
TY1A-LR1P0CX68 PSH1YOL054W 1221 nt7.53□□□□□ -1.2
TY1A-LR1P0CX68 RER2YBR002C 861 nt7.53□□□□□ -1.2
TY1A-LR1P0CX68 MRPS9YBR146W 837 nt7.53□□□□□ -1.2
TY1A-LR1P0CX68 IDS2YJL146W 1410 nt7.52□□□□□ -1.2
TY1A-LR1P0CX68 DON1YDR273W 1098 nt7.52□□□□□ -1.21
TY1A-LR1P0CX68 YGR111WYGR111W 1203 nt7.52□□□□□ -1.21
TY1A-LR1P0CX68 YJL007CYJL007C 315 nt7.52□□□□□ -1.21
TY1A-LR1P0CX68 RFC2YJR068W 1062 nt7.52□□□□□ -1.21
TY1A-LR1P0CX68 RTG1YOL067C 534 nt7.52□□□□□ -1.21
TY1A-LR1P0CX68 YBR051WYBR051W 351 nt7.52□□□□□ -1.21
TY1A-LR1P0CX68 SEC61YLR378C 1443 nt7.52□□□□□ -1.21
TY1A-LR1P0CX68 TFG1YGR186W 2208 nt7.51□□□□□ -1.21
TY1A-LR1P0CX68 VAB2YEL005C 849 nt7.51□□□□□ -1.21
TY1A-LR1P0CX68 YFR032C-BYFR032C-B 264 nt7.51□□□□□ -1.21
TY1A-LR1P0CX68 YJL114WYJL114W 681 nt7.51□□□□□ -1.21
TY1A-LR1P0CX68 RBG1YAL036C 1110 nt7.51□□□□□ -1.21
TY1A-LR1P0CX68 VMA5YKL080W 1179 nt7.51□□□□□ -1.21
TY1A-LR1P0CX68 YMR007WYMR007W 381 nt7.51□□□□□ -1.21
TY1A-LR1P0CX68 SWM2YNR004W 441 nt7.51□□□□□ -1.21
TY1A-LR1P0CX68 GPN2YOR262W 1044 nt7.51□□□□□ -1.21
TY1A-LR1P0CX68 ALP1YNL270C 1722 nt7.51□□□□□ -1.21
TY1A-LR1P0CX68 HXT11YOL156W 1704 nt7.5□□□□□ -1.21
TY1A-LR1P0CX68 CAK1YFL029C 1107 nt7.5□□□□□ -1.21
TY1A-LR1P0CX68 YMR030W-AYMR030W-A 291 nt7.5□□□□□ -1.21
TY1A-LR1P0CX68 YIM2YMR151W 438 nt7.5□□□□□ -1.21
TY1A-LR1P0CX68 VPS21YOR089C 633 nt7.5□□□□□ -1.21
TY1A-LR1P0CX68 YOR263CYOR263C 408 nt7.5□□□□□ -1.21
TY1A-LR1P0CX68 SCO1YBR037C 888 nt7.5□□□□□ -1.21
TY1A-LR1P0CX68 CST9YLR394W 1449 nt7.5□□□□□ -1.21
TY1A-LR1P0CX68 SFL1YOR140W 2301 nt7.5□□□□□ -1.21
TY1A-LR1P0CX68 POP2YNR052C 1302 nt7.5□□□□□ -1.21
TY1A-LR1P0CX68 PRR2YDL214C 2100 nt7.49□□□□□ -1.21
TY1A-LR1P0CX68 FUB1YCR076C 753 nt7.49□□□□□ -1.21
TY1A-LR1P0CX68 YGL159WYGL159W 1113 nt7.49□□□□□ -1.21
TY1A-LR1P0CX68 HTD2YHR067W 843 nt7.49□□□□□ -1.21
TY1A-LR1P0CX68 MRPL8YJL063C 717 nt7.49□□□□□ -1.21
TY1A-LR1P0CX68 YNL203CYNL203C 612 nt7.49□□□□□ -1.21
TY1A-LR1P0CX68 GET4YOR164C 939 nt7.49□□□□□ -1.21
TY1A-LR1P0CX68 LIP5YOR196C 1245 nt7.49□□□□□ -1.21
TY1A-LR1P0CX68 SPR2YOR214C 711 nt7.49□□□□□ -1.21
TY1A-LR1P0CX68 TUM1YOR251C 915 nt7.49□□□□□ -1.21
TY1A-LR1P0CX68 GGC1YDL198C 903 nt7.48□□□□□ -1.21
TY1A-LR1P0CX68 YDR320W-BYDR320W-B 138 nt7.48□□□□□ -1.21
TY1A-LR1P0CX68 MET28YIR017C 564 nt7.48□□□□□ -1.21
TY1A-LR1P0CX68 BUD19YJL188C 309 nt7.48□□□□□ -1.21
TY1A-LR1P0CX68 MTW1YAL034W-A 870 nt7.48□□□□□ -1.21
TY1A-LR1P0CX68 DAN1YJR150C 897 nt7.48□□□□□ -1.21
TY1A-LR1P0CX68 RLP24YLR009W 600 nt7.48□□□□□ -1.21
TY1A-LR1P0CX68 YMR193C-AYMR193C-A 387 nt7.48□□□□□ -1.21
TY1A-LR1P0CX68 MRP2YPR166C 348 nt7.48□□□□□ -1.21
TY1A-LR1P0CX68 DEG1YFL001W 1329 nt7.48□□□□□ -1.21
TY1A-LR1P0CX68 TFC6YDR362C 2019 nt7.47□□□□□ -1.21
TY1A-LR1P0CX68 OPT1YJL212C 2400 nt7.47□□□□□ -1.21
TY1A-LR1P0CX68 LAS17YOR181W 1902 nt7.47□□□□□ -1.21
TY1A-LR1P0CX68 YGL034CYGL034C 366 nt7.47□□□□□ -1.21
TY1A-LR1P0CX68 SWD2YKL018W 990 nt7.47□□□□□ -1.21
TY1A-LR1P0CX68 YLR326WYLR326W 723 nt7.47□□□□□ -1.21
TY1A-LR1P0CX68 SGT1YOR057W 1188 nt7.47□□□□□ -1.21
TY1A-LR1P0CX68 YSY6YBR162W-A 198 nt7.47□□□□□ -1.21
TY1A-LR1P0CX68 YJR061WYJR061W 2808 nt7.47□□□□□ -1.21
TY1A-LR1P0CX68 FKH1YIL131C 1455 nt7.47□□□□□ -1.21
TY1A-LR1P0CX68 HOG1YLR113W 1308 nt7.47□□□□□ -1.21
TY1A-LR1P0CX68 ART10YLR392C 1557 nt7.46□□□□□ -1.21
TY1A-LR1P0CX68 HMLALPHA1YCL066W 528 nt7.46□□□□□ -1.22
TY1A-LR1P0CX68 MATALPHA1YCR040W 528 nt7.46□□□□□ -1.22
TY1A-LR1P0CX68 INH1YDL181W 258 nt7.46□□□□□ -1.22
TY1A-LR1P0CX68 SHU2YDR078C 672 nt7.46□□□□□ -1.22
TY1A-LR1P0CX68 YDR215CYDR215C 414 nt7.46□□□□□ -1.22
TY1A-LR1P0CX68 MRPL35YDR322W 1104 nt7.46□□□□□ -1.22
TY1A-LR1P0CX68 YGL262WYGL262W 528 nt7.46□□□□□ -1.22
TY1A-LR1P0CX68 YNL143CYNL143C 393 nt7.46□□□□□ -1.22
TY1A-LR1P0CX68 MRPL22YNL177C 930 nt7.46□□□□□ -1.22
TY1A-LR1P0CX68 YOR225WYOR225W 330 nt7.46□□□□□ -1.22
TY1A-LR1P0CX68 VMA11YPL234C 495 nt7.46□□□□□ -1.22
TY1A-LR1P0CX68 BBP1YPL255W 1158 nt7.46□□□□□ -1.22
TY1A-LR1P0CX68 VID24YBR105C 1089 nt7.46□□□□□ -1.22
TY1A-LR1P0CX68 snR4snR4 186 nt7.46□□□□□ -1.22
TY1A-LR1P0CX68 UIP5YKR044W 1332 nt7.46□□□□□ -1.22
TY1A-LR1P0CX68 VPS30YPL120W 1674 nt7.45□□□□□ -1.22
TY1A-LR1P0CX68 SLC1YDL052C 912 nt7.45□□□□□ -1.22
TY1A-LR1P0CX68 LYS20YDL182W 1287 nt7.45□□□□□ -1.22
TY1A-LR1P0CX68 YDR455CYDR455C 309 nt7.45□□□□□ -1.22
TY1A-LR1P0CX68 CAF16YFL028C 870 nt7.45□□□□□ -1.22
TY1A-LR1P0CX68 RPS31YLR167W 459 nt7.45□□□□□ -1.22
TY1A-LR1P0CX68 YMR166CYMR166C 1107 nt7.45□□□□□ -1.22
TY1A-LR1P0CX68 YNL190WYNL190W 615 nt7.45□□□□□ -1.22
TY1A-LR1P0CX68 MPD1YOR288C 957 nt7.45□□□□□ -1.22
Retrieved 100 of 7,029 protein–RNA pairs in 70.5 ms