Protein–RNA interactions for Protein: P02656

APOC3, Apolipoprotein C-III, humanhuman

Predictions only

Length 99 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC3P02656 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC18.88■□□□□ 0.61
APOC3P02656 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
APOC3P02656 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
APOC3P02656 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
APOC3P02656 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
APOC3P02656 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
APOC3P02656 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
APOC3P02656 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC18.87■□□□□ 0.61
APOC3P02656 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
APOC3P02656 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
APOC3P02656 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC18.87■□□□□ 0.61
APOC3P02656 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
APOC3P02656 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
APOC3P02656 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC18.87■□□□□ 0.61
APOC3P02656 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC18.87■□□□□ 0.61
APOC3P02656 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
APOC3P02656 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
APOC3P02656 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
APOC3P02656 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
APOC3P02656 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
APOC3P02656 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC18.86■□□□□ 0.61
APOC3P02656 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC18.86■□□□□ 0.61
APOC3P02656 DUSP8P3-201ENST00000399571 1760 ntBASIC18.86■□□□□ 0.61
APOC3P02656 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
APOC3P02656 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
APOC3P02656 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
APOC3P02656 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
APOC3P02656 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
APOC3P02656 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC18.86■□□□□ 0.61
APOC3P02656 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
APOC3P02656 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
APOC3P02656 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
APOC3P02656 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
APOC3P02656 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
APOC3P02656 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.85■□□□□ 0.61
APOC3P02656 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
APOC3P02656 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
APOC3P02656 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
APOC3P02656 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
APOC3P02656 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
APOC3P02656 AC092667.1-201ENST00000434301 2586 ntBASIC18.85■□□□□ 0.61
APOC3P02656 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
APOC3P02656 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
APOC3P02656 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
APOC3P02656 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
APOC3P02656 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
APOC3P02656 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
APOC3P02656 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
APOC3P02656 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
APOC3P02656 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
APOC3P02656 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
APOC3P02656 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
APOC3P02656 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC18.83■□□□□ 0.6
APOC3P02656 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
APOC3P02656 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC18.83■□□□□ 0.6
APOC3P02656 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
APOC3P02656 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC18.83■□□□□ 0.6
APOC3P02656 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
APOC3P02656 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
APOC3P02656 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
APOC3P02656 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
APOC3P02656 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.82■□□□□ 0.6
APOC3P02656 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
APOC3P02656 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
APOC3P02656 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
APOC3P02656 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
APOC3P02656 AC004812.2-201ENST00000611079 2094 ntBASIC18.82■□□□□ 0.6
APOC3P02656 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
APOC3P02656 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
APOC3P02656 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
APOC3P02656 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
APOC3P02656 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
APOC3P02656 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
APOC3P02656 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
APOC3P02656 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
APOC3P02656 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC18.81■□□□□ 0.6
APOC3P02656 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
APOC3P02656 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC18.81■□□□□ 0.6
APOC3P02656 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC18.81■□□□□ 0.6
APOC3P02656 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
APOC3P02656 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
APOC3P02656 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
APOC3P02656 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
APOC3P02656 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
APOC3P02656 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
APOC3P02656 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
APOC3P02656 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
APOC3P02656 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
APOC3P02656 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
APOC3P02656 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
APOC3P02656 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
APOC3P02656 WASH5P-204ENST00000632292 975 ntBASIC18.8■□□□□ 0.6
APOC3P02656 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
APOC3P02656 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
APOC3P02656 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
APOC3P02656 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
APOC3P02656 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC18.8■□□□□ 0.6
APOC3P02656 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
APOC3P02656 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
APOC3P02656 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 15.6 ms