Protein–RNA interactions for Protein: A0A576

TCRBV9S1A1T, T-cell receptor beta variable 3-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV9S1A1TA0A576 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC23.54■■□□□ 1.36
TCRBV9S1A1TA0A576 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC23.54■■□□□ 1.36
TCRBV9S1A1TA0A576 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC23.54■■□□□ 1.36
TCRBV9S1A1TA0A576 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC23.53■■□□□ 1.36
TCRBV9S1A1TA0A576 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
TCRBV9S1A1TA0A576 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
TCRBV9S1A1TA0A576 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
TCRBV9S1A1TA0A576 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC23.53■■□□□ 1.36
TCRBV9S1A1TA0A576 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
TCRBV9S1A1TA0A576 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC23.53■■□□□ 1.36
TCRBV9S1A1TA0A576 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC23.53■■□□□ 1.36
TCRBV9S1A1TA0A576 AC068473.5-201ENST00000616428 2072 ntBASIC23.53■■□□□ 1.36
TCRBV9S1A1TA0A576 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC23.52■■□□□ 1.36
TCRBV9S1A1TA0A576 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
TCRBV9S1A1TA0A576 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC23.52■■□□□ 1.36
TCRBV9S1A1TA0A576 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC23.52■■□□□ 1.36
TCRBV9S1A1TA0A576 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
TCRBV9S1A1TA0A576 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
TCRBV9S1A1TA0A576 AC026202.3-201ENST00000600805 1127 ntBASIC23.52■■□□□ 1.36
TCRBV9S1A1TA0A576 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
TCRBV9S1A1TA0A576 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC23.52■■□□□ 1.36
TCRBV9S1A1TA0A576 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
TCRBV9S1A1TA0A576 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC23.52■■□□□ 1.36
TCRBV9S1A1TA0A576 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC23.52■■□□□ 1.36
TCRBV9S1A1TA0A576 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC23.51■■□□□ 1.35
TCRBV9S1A1TA0A576 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
TCRBV9S1A1TA0A576 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC23.51■■□□□ 1.35
TCRBV9S1A1TA0A576 AC012676.1-201ENST00000574705 1949 ntBASIC23.51■■□□□ 1.35
TCRBV9S1A1TA0A576 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC23.51■■□□□ 1.35
TCRBV9S1A1TA0A576 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
TCRBV9S1A1TA0A576 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
TCRBV9S1A1TA0A576 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC23.51■■□□□ 1.35
TCRBV9S1A1TA0A576 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC23.51■■□□□ 1.35
TCRBV9S1A1TA0A576 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
TCRBV9S1A1TA0A576 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC23.51■■□□□ 1.35
TCRBV9S1A1TA0A576 DUSP8P5-201ENST00000422884 1815 ntBASIC23.51■■□□□ 1.35
TCRBV9S1A1TA0A576 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC23.51■■□□□ 1.35
TCRBV9S1A1TA0A576 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC23.51■■□□□ 1.35
TCRBV9S1A1TA0A576 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
TCRBV9S1A1TA0A576 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
TCRBV9S1A1TA0A576 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
TCRBV9S1A1TA0A576 KRT18P10-201ENST00000388836 1287 ntBASIC23.5■■□□□ 1.35
TCRBV9S1A1TA0A576 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
TCRBV9S1A1TA0A576 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC23.49■■□□□ 1.35
TCRBV9S1A1TA0A576 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC23.49■■□□□ 1.35
TCRBV9S1A1TA0A576 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC23.49■■□□□ 1.35
TCRBV9S1A1TA0A576 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
TCRBV9S1A1TA0A576 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC23.48■■□□□ 1.35
TCRBV9S1A1TA0A576 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
TCRBV9S1A1TA0A576 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC23.48■■□□□ 1.35
TCRBV9S1A1TA0A576 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC23.48■■□□□ 1.35
TCRBV9S1A1TA0A576 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
TCRBV9S1A1TA0A576 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC23.47■■□□□ 1.35
TCRBV9S1A1TA0A576 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
TCRBV9S1A1TA0A576 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC23.47■■□□□ 1.35
TCRBV9S1A1TA0A576 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC23.47■■□□□ 1.35
TCRBV9S1A1TA0A576 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC23.47■■□□□ 1.35
TCRBV9S1A1TA0A576 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC23.47■■□□□ 1.35
TCRBV9S1A1TA0A576 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
TCRBV9S1A1TA0A576 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
TCRBV9S1A1TA0A576 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
TCRBV9S1A1TA0A576 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC23.45■■□□□ 1.34
TCRBV9S1A1TA0A576 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
TCRBV9S1A1TA0A576 HES4-202ENST00000428771 1040 ntTSL 2 BASIC23.45■■□□□ 1.34
TCRBV9S1A1TA0A576 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC23.45■■□□□ 1.34
TCRBV9S1A1TA0A576 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC23.45■■□□□ 1.34
TCRBV9S1A1TA0A576 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
TCRBV9S1A1TA0A576 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
TCRBV9S1A1TA0A576 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC23.44■■□□□ 1.34
TCRBV9S1A1TA0A576 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
TCRBV9S1A1TA0A576 GPX1-201ENST00000419349 1106 ntBASIC23.44■■□□□ 1.34
TCRBV9S1A1TA0A576 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC23.44■■□□□ 1.34
TCRBV9S1A1TA0A576 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC23.44■■□□□ 1.34
TCRBV9S1A1TA0A576 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
TCRBV9S1A1TA0A576 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
TCRBV9S1A1TA0A576 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
TCRBV9S1A1TA0A576 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
TCRBV9S1A1TA0A576 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
TCRBV9S1A1TA0A576 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
TCRBV9S1A1TA0A576 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
TCRBV9S1A1TA0A576 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC23.43■■□□□ 1.34
TCRBV9S1A1TA0A576 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
TCRBV9S1A1TA0A576 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC23.43■■□□□ 1.34
TCRBV9S1A1TA0A576 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
TCRBV9S1A1TA0A576 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
TCRBV9S1A1TA0A576 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
TCRBV9S1A1TA0A576 MIR4449-201ENST00000578365 66 ntBASIC23.42■■□□□ 1.34
TCRBV9S1A1TA0A576 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC23.42■■□□□ 1.34
TCRBV9S1A1TA0A576 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC23.42■■□□□ 1.34
TCRBV9S1A1TA0A576 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
TCRBV9S1A1TA0A576 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC23.42■■□□□ 1.34
TCRBV9S1A1TA0A576 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC23.41■■□□□ 1.34
TCRBV9S1A1TA0A576 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
TCRBV9S1A1TA0A576 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC23.41■■□□□ 1.34
TCRBV9S1A1TA0A576 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC23.41■■□□□ 1.34
TCRBV9S1A1TA0A576 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
TCRBV9S1A1TA0A576 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
TCRBV9S1A1TA0A576 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC23.4■■□□□ 1.34
TCRBV9S1A1TA0A576 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
TCRBV9S1A1TA0A576 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC23.4■■□□□ 1.34
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms