Protein–RNA interactions for Protein: Q9Y5R8

TRAPPC1, Trafficking protein particle complex subunit 1, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1Q9Y5R8 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
TRAPPC1Q9Y5R8 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
TRAPPC1Q9Y5R8 GTPBP4-202ENST00000360803 5075 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
TRAPPC1Q9Y5R8 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
TRAPPC1Q9Y5R8 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
TRAPPC1Q9Y5R8 CD99L2-208ENST00000613030 3742 ntAPPRIS ALT2 TSL 2 BASIC11.98□□□□□ -0.49
TRAPPC1Q9Y5R8 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC11.98□□□□□ -0.49
TRAPPC1Q9Y5R8 NDRG4-255ENST00000570248 3207 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
TRAPPC1Q9Y5R8 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
TRAPPC1Q9Y5R8 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
TRAPPC1Q9Y5R8 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
TRAPPC1Q9Y5R8 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC11.98□□□□□ -0.49
TRAPPC1Q9Y5R8 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
TRAPPC1Q9Y5R8 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC11.98□□□□□ -0.49
TRAPPC1Q9Y5R8 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
TRAPPC1Q9Y5R8 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC11.98□□□□□ -0.49
TRAPPC1Q9Y5R8 STRN-202ENST00000379213 2254 ntTSL 5 BASIC11.98□□□□□ -0.49
TRAPPC1Q9Y5R8 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC11.98□□□□□ -0.49
TRAPPC1Q9Y5R8 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
TRAPPC1Q9Y5R8 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC11.98□□□□□ -0.49
TRAPPC1Q9Y5R8 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
TRAPPC1Q9Y5R8 SCN2B-201ENST00000278947 5826 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
TRAPPC1Q9Y5R8 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC11.98□□□□□ -0.49
TRAPPC1Q9Y5R8 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC11.98□□□□□ -0.49
TRAPPC1Q9Y5R8 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC11.98□□□□□ -0.49
TRAPPC1Q9Y5R8 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC11.98□□□□□ -0.49
TRAPPC1Q9Y5R8 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
TRAPPC1Q9Y5R8 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC11.98□□□□□ -0.49
TRAPPC1Q9Y5R8 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC11.98□□□□□ -0.49
TRAPPC1Q9Y5R8 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
TRAPPC1Q9Y5R8 TNN-202ENST00000621086 4234 ntTSL 5 BASIC11.98□□□□□ -0.49
TRAPPC1Q9Y5R8 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
TRAPPC1Q9Y5R8 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC11.98□□□□□ -0.49
TRAPPC1Q9Y5R8 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC11.98□□□□□ -0.49
TRAPPC1Q9Y5R8 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
TRAPPC1Q9Y5R8 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
TRAPPC1Q9Y5R8 PRR31-201ENST00000371629 978 ntTSL 2 BASIC11.98□□□□□ -0.49
TRAPPC1Q9Y5R8 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC11.98□□□□□ -0.49
TRAPPC1Q9Y5R8 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC11.98□□□□□ -0.49
TRAPPC1Q9Y5R8 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
TRAPPC1Q9Y5R8 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC11.98□□□□□ -0.49
TRAPPC1Q9Y5R8 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC11.98□□□□□ -0.49
TRAPPC1Q9Y5R8 AL512604.3-201ENST00000569583 964 ntBASIC11.98□□□□□ -0.49
TRAPPC1Q9Y5R8 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC11.98□□□□□ -0.49
TRAPPC1Q9Y5R8 REXO1L10P-201ENST00000615707 1290 ntBASIC11.98□□□□□ -0.49
TRAPPC1Q9Y5R8 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC11.98□□□□□ -0.49
TRAPPC1Q9Y5R8 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
TRAPPC1Q9Y5R8 REXO1L12P-201ENST00000622156 912 ntBASIC11.98□□□□□ -0.49
TRAPPC1Q9Y5R8 DECR2-212ENST00000627716 352 ntTSL 2 BASIC11.98□□□□□ -0.49
TRAPPC1Q9Y5R8 OTP-201ENST00000306422 3669 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
TRAPPC1Q9Y5R8 GLB1L3-201ENST00000389887 3566 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
TRAPPC1Q9Y5R8 LAMB2-201ENST00000305544 5643 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
TRAPPC1Q9Y5R8 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
TRAPPC1Q9Y5R8 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC11.98□□□□□ -0.49
TRAPPC1Q9Y5R8 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
TRAPPC1Q9Y5R8 CACNA1G-208ENST00000442258 7226 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
TRAPPC1Q9Y5R8 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC11.98□□□□□ -0.49
TRAPPC1Q9Y5R8 TCF3-201ENST00000262965 4451 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
TRAPPC1Q9Y5R8 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC11.98□□□□□ -0.49
TRAPPC1Q9Y5R8 PLA2G4F-202ENST00000397272 5587 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
TRAPPC1Q9Y5R8 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
TRAPPC1Q9Y5R8 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC11.98□□□□□ -0.49
TRAPPC1Q9Y5R8 MCC-201ENST00000302475 8257 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
TRAPPC1Q9Y5R8 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
TRAPPC1Q9Y5R8 AC152010.1-201ENST00000415779 2006 ntBASIC11.98□□□□□ -0.49
TRAPPC1Q9Y5R8 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
TRAPPC1Q9Y5R8 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
TRAPPC1Q9Y5R8 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
TRAPPC1Q9Y5R8 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
TRAPPC1Q9Y5R8 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
TRAPPC1Q9Y5R8 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
TRAPPC1Q9Y5R8 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
TRAPPC1Q9Y5R8 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
TRAPPC1Q9Y5R8 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
TRAPPC1Q9Y5R8 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
TRAPPC1Q9Y5R8 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
TRAPPC1Q9Y5R8 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC11.97□□□□□ -0.49
TRAPPC1Q9Y5R8 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
TRAPPC1Q9Y5R8 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
TRAPPC1Q9Y5R8 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC11.97□□□□□ -0.49
TRAPPC1Q9Y5R8 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC11.97□□□□□ -0.49
TRAPPC1Q9Y5R8 AC125634.1-201ENST00000438758 1403 ntBASIC11.97□□□□□ -0.49
TRAPPC1Q9Y5R8 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC11.97□□□□□ -0.49
TRAPPC1Q9Y5R8 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
TRAPPC1Q9Y5R8 LINC01271-201ENST00000441214 2250 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
TRAPPC1Q9Y5R8 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
TRAPPC1Q9Y5R8 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC11.97□□□□□ -0.49
TRAPPC1Q9Y5R8 AC108002.1-201ENST00000520572 5684 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
TRAPPC1Q9Y5R8 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
TRAPPC1Q9Y5R8 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC11.97□□□□□ -0.49
TRAPPC1Q9Y5R8 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC11.97□□□□□ -0.49
TRAPPC1Q9Y5R8 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
TRAPPC1Q9Y5R8 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC11.97□□□□□ -0.49
TRAPPC1Q9Y5R8 AP000523.1-201ENST00000398242 1049 ntBASIC11.97□□□□□ -0.49
TRAPPC1Q9Y5R8 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
TRAPPC1Q9Y5R8 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
TRAPPC1Q9Y5R8 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC11.97□□□□□ -0.49
TRAPPC1Q9Y5R8 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC11.97□□□□□ -0.49
TRAPPC1Q9Y5R8 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
TRAPPC1Q9Y5R8 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms