Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
PCDHGB1Q9Y5G3 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC14.52□□□□□ -0.08
PCDHGB1Q9Y5G3 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
PCDHGB1Q9Y5G3 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
PCDHGB1Q9Y5G3 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
PCDHGB1Q9Y5G3 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
PCDHGB1Q9Y5G3 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
PCDHGB1Q9Y5G3 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC14.52□□□□□ -0.08
PCDHGB1Q9Y5G3 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
PCDHGB1Q9Y5G3 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
PCDHGB1Q9Y5G3 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC14.52□□□□□ -0.08
PCDHGB1Q9Y5G3 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC14.52□□□□□ -0.09
PCDHGB1Q9Y5G3 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC14.52□□□□□ -0.09
PCDHGB1Q9Y5G3 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
PCDHGB1Q9Y5G3 PMS2P4-201ENST00000412466 1052 ntBASIC14.52□□□□□ -0.09
PCDHGB1Q9Y5G3 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC14.52□□□□□ -0.09
PCDHGB1Q9Y5G3 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC14.52□□□□□ -0.09
PCDHGB1Q9Y5G3 FGFR3P6-201ENST00000457012 610 ntBASIC14.52□□□□□ -0.09
PCDHGB1Q9Y5G3 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC14.52□□□□□ -0.09
PCDHGB1Q9Y5G3 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
PCDHGB1Q9Y5G3 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC14.52□□□□□ -0.09
PCDHGB1Q9Y5G3 AC008608.2-201ENST00000606089 416 ntBASIC14.52□□□□□ -0.09
PCDHGB1Q9Y5G3 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC14.52□□□□□ -0.09
PCDHGB1Q9Y5G3 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC14.52□□□□□ -0.09
PCDHGB1Q9Y5G3 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PCDHGB1Q9Y5G3 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PCDHGB1Q9Y5G3 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.09
PCDHGB1Q9Y5G3 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
PCDHGB1Q9Y5G3 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
PCDHGB1Q9Y5G3 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC14.52□□□□□ -0.09
PCDHGB1Q9Y5G3 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.09
PCDHGB1Q9Y5G3 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC14.52□□□□□ -0.09
PCDHGB1Q9Y5G3 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PCDHGB1Q9Y5G3 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PCDHGB1Q9Y5G3 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.09
PCDHGB1Q9Y5G3 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PCDHGB1Q9Y5G3 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
PCDHGB1Q9Y5G3 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC14.52□□□□□ -0.09
PCDHGB1Q9Y5G3 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
PCDHGB1Q9Y5G3 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC14.52□□□□□ -0.09
PCDHGB1Q9Y5G3 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PCDHGB1Q9Y5G3 AC005252.3-201ENST00000623855 2258 ntBASIC14.52□□□□□ -0.09
PCDHGB1Q9Y5G3 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
PCDHGB1Q9Y5G3 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
PCDHGB1Q9Y5G3 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
PCDHGB1Q9Y5G3 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
PCDHGB1Q9Y5G3 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
PCDHGB1Q9Y5G3 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
PCDHGB1Q9Y5G3 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PCDHGB1Q9Y5G3 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PCDHGB1Q9Y5G3 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC14.51□□□□□ -0.09
PCDHGB1Q9Y5G3 AC007686.3-201ENST00000619017 3487 ntBASIC14.51□□□□□ -0.09
PCDHGB1Q9Y5G3 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PCDHGB1Q9Y5G3 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
PCDHGB1Q9Y5G3 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PCDHGB1Q9Y5G3 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
PCDHGB1Q9Y5G3 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC14.51□□□□□ -0.09
PCDHGB1Q9Y5G3 RAB17-203ENST00000409576 466 ntTSL 3 BASIC14.51□□□□□ -0.09
PCDHGB1Q9Y5G3 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
PCDHGB1Q9Y5G3 AL031284.1-201ENST00000419297 478 ntBASIC14.51□□□□□ -0.09
PCDHGB1Q9Y5G3 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
PCDHGB1Q9Y5G3 AC093909.1-201ENST00000504731 1122 ntBASIC14.51□□□□□ -0.09
PCDHGB1Q9Y5G3 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
PCDHGB1Q9Y5G3 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC14.51□□□□□ -0.09
PCDHGB1Q9Y5G3 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PCDHGB1Q9Y5G3 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC14.51□□□□□ -0.09
PCDHGB1Q9Y5G3 MIR4515-201ENST00000584082 81 ntBASIC14.51□□□□□ -0.09
PCDHGB1Q9Y5G3 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC14.51□□□□□ -0.09
PCDHGB1Q9Y5G3 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC14.51□□□□□ -0.09
PCDHGB1Q9Y5G3 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC14.51□□□□□ -0.09
PCDHGB1Q9Y5G3 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PCDHGB1Q9Y5G3 C1R-201ENST00000535233 2211 ntTSL 2 BASIC14.51□□□□□ -0.09
PCDHGB1Q9Y5G3 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PCDHGB1Q9Y5G3 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PCDHGB1Q9Y5G3 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PCDHGB1Q9Y5G3 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
PCDHGB1Q9Y5G3 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PCDHGB1Q9Y5G3 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
PCDHGB1Q9Y5G3 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PCDHGB1Q9Y5G3 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC14.51□□□□□ -0.09
PCDHGB1Q9Y5G3 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PCDHGB1Q9Y5G3 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PCDHGB1Q9Y5G3 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC14.51□□□□□ -0.09
PCDHGB1Q9Y5G3 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC14.51□□□□□ -0.09
PCDHGB1Q9Y5G3 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC14.51□□□□□ -0.09
PCDHGB1Q9Y5G3 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PCDHGB1Q9Y5G3 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PCDHGB1Q9Y5G3 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PCDHGB1Q9Y5G3 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PCDHGB1Q9Y5G3 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PCDHGB1Q9Y5G3 CYP51A1P2-201ENST00000419457 1499 ntBASIC14.5□□□□□ -0.09
PCDHGB1Q9Y5G3 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PCDHGB1Q9Y5G3 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC14.5□□□□□ -0.09
PCDHGB1Q9Y5G3 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
PCDHGB1Q9Y5G3 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC14.5□□□□□ -0.09
PCDHGB1Q9Y5G3 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
PCDHGB1Q9Y5G3 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
PCDHGB1Q9Y5G3 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
PCDHGB1Q9Y5G3 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC14.5□□□□□ -0.09
PCDHGB1Q9Y5G3 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC14.5□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 72.3 ms