Protein–RNA interactions for Protein: Q9P1Z2

CALCOCO1, Calcium-binding and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1Q9P1Z2 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC17.34■□□□□ 0.37
CALCOCO1Q9P1Z2 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CALCOCO1Q9P1Z2 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
CALCOCO1Q9P1Z2 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CALCOCO1Q9P1Z2 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CALCOCO1Q9P1Z2 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
CALCOCO1Q9P1Z2 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CALCOCO1Q9P1Z2 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CALCOCO1Q9P1Z2 STOM-202ENST00000347359 870 ntTSL 2 BASIC17.34■□□□□ 0.37
CALCOCO1Q9P1Z2 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CALCOCO1Q9P1Z2 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
CALCOCO1Q9P1Z2 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
CALCOCO1Q9P1Z2 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
CALCOCO1Q9P1Z2 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC17.34■□□□□ 0.37
CALCOCO1Q9P1Z2 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC17.34■□□□□ 0.37
CALCOCO1Q9P1Z2 TSEN15P1-201ENST00000423257 515 ntBASIC17.34■□□□□ 0.37
CALCOCO1Q9P1Z2 WDR53-204ENST00000433160 887 ntTSL 5 BASIC17.34■□□□□ 0.37
CALCOCO1Q9P1Z2 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC17.34■□□□□ 0.37
CALCOCO1Q9P1Z2 CICP20-201ENST00000443330 2801 ntBASIC17.34■□□□□ 0.37
CALCOCO1Q9P1Z2 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CALCOCO1Q9P1Z2 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CALCOCO1Q9P1Z2 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC17.34■□□□□ 0.37
CALCOCO1Q9P1Z2 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC17.34■□□□□ 0.37
CALCOCO1Q9P1Z2 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC17.34■□□□□ 0.37
CALCOCO1Q9P1Z2 AC109635.5-201ENST00000533593 962 ntBASIC17.34■□□□□ 0.37
CALCOCO1Q9P1Z2 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC17.34■□□□□ 0.37
CALCOCO1Q9P1Z2 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC17.34■□□□□ 0.37
CALCOCO1Q9P1Z2 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
CALCOCO1Q9P1Z2 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CALCOCO1Q9P1Z2 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC17.34■□□□□ 0.37
CALCOCO1Q9P1Z2 MIR3909-201ENST00000579518 119 ntBASIC17.34■□□□□ 0.37
CALCOCO1Q9P1Z2 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
CALCOCO1Q9P1Z2 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC17.34■□□□□ 0.37
CALCOCO1Q9P1Z2 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CALCOCO1Q9P1Z2 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
CALCOCO1Q9P1Z2 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
CALCOCO1Q9P1Z2 AC093028.1-201ENST00000622998 982 ntBASIC17.34■□□□□ 0.37
CALCOCO1Q9P1Z2 AC092902.6-201ENST00000641783 218 ntBASIC17.34■□□□□ 0.37
CALCOCO1Q9P1Z2 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CALCOCO1Q9P1Z2 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CALCOCO1Q9P1Z2 AC107918.4-201ENST00000641966 3141 ntBASIC17.34■□□□□ 0.37
CALCOCO1Q9P1Z2 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CALCOCO1Q9P1Z2 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CALCOCO1Q9P1Z2 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CALCOCO1Q9P1Z2 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CALCOCO1Q9P1Z2 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CALCOCO1Q9P1Z2 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CALCOCO1Q9P1Z2 CNTNAP3P2-201ENST00000617175 3861 ntBASIC17.33■□□□□ 0.37
CALCOCO1Q9P1Z2 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CALCOCO1Q9P1Z2 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CALCOCO1Q9P1Z2 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
CALCOCO1Q9P1Z2 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC17.33■□□□□ 0.37
CALCOCO1Q9P1Z2 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC17.33■□□□□ 0.37
CALCOCO1Q9P1Z2 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC17.33■□□□□ 0.37
CALCOCO1Q9P1Z2 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CALCOCO1Q9P1Z2 GGT3P-204ENST00000453783 1664 ntBASIC17.33■□□□□ 0.37
CALCOCO1Q9P1Z2 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
CALCOCO1Q9P1Z2 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CALCOCO1Q9P1Z2 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
CALCOCO1Q9P1Z2 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CALCOCO1Q9P1Z2 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
CALCOCO1Q9P1Z2 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC17.33■□□□□ 0.37
CALCOCO1Q9P1Z2 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CALCOCO1Q9P1Z2 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CALCOCO1Q9P1Z2 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CALCOCO1Q9P1Z2 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC17.33■□□□□ 0.36
CALCOCO1Q9P1Z2 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CALCOCO1Q9P1Z2 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CALCOCO1Q9P1Z2 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC17.33■□□□□ 0.36
CALCOCO1Q9P1Z2 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CALCOCO1Q9P1Z2 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
CALCOCO1Q9P1Z2 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CALCOCO1Q9P1Z2 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC17.33■□□□□ 0.36
CALCOCO1Q9P1Z2 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC17.33■□□□□ 0.36
CALCOCO1Q9P1Z2 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC17.33■□□□□ 0.36
CALCOCO1Q9P1Z2 METTL23-205ENST00000588302 925 ntTSL 5 BASIC17.33■□□□□ 0.36
CALCOCO1Q9P1Z2 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CALCOCO1Q9P1Z2 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC17.33■□□□□ 0.36
CALCOCO1Q9P1Z2 AC006486.2-201ENST00000624246 2199 ntBASIC17.33■□□□□ 0.36
CALCOCO1Q9P1Z2 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CALCOCO1Q9P1Z2 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC17.33■□□□□ 0.36
CALCOCO1Q9P1Z2 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CALCOCO1Q9P1Z2 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CALCOCO1Q9P1Z2 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CALCOCO1Q9P1Z2 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC17.33■□□□□ 0.36
CALCOCO1Q9P1Z2 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CALCOCO1Q9P1Z2 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CALCOCO1Q9P1Z2 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC17.32■□□□□ 0.36
CALCOCO1Q9P1Z2 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
CALCOCO1Q9P1Z2 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CALCOCO1Q9P1Z2 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CALCOCO1Q9P1Z2 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CALCOCO1Q9P1Z2 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CALCOCO1Q9P1Z2 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
CALCOCO1Q9P1Z2 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
CALCOCO1Q9P1Z2 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
CALCOCO1Q9P1Z2 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
CALCOCO1Q9P1Z2 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CALCOCO1Q9P1Z2 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
CALCOCO1Q9P1Z2 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms