Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC14.19□□□□□ -0.14
PARPBPQ9NWS1 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
PARPBPQ9NWS1 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC14.19□□□□□ -0.14
PARPBPQ9NWS1 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PARPBPQ9NWS1 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PARPBPQ9NWS1 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PARPBPQ9NWS1 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC14.19□□□□□ -0.14
PARPBPQ9NWS1 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC14.19□□□□□ -0.14
PARPBPQ9NWS1 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
PARPBPQ9NWS1 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC14.18□□□□□ -0.14
PARPBPQ9NWS1 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
PARPBPQ9NWS1 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC14.18□□□□□ -0.14
PARPBPQ9NWS1 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
PARPBPQ9NWS1 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
PARPBPQ9NWS1 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
PARPBPQ9NWS1 LINC02447-202ENST00000501888 2146 ntBASIC14.18□□□□□ -0.14
PARPBPQ9NWS1 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC14.18□□□□□ -0.14
PARPBPQ9NWS1 CDC14C-201ENST00000428251 1719 ntBASIC14.18□□□□□ -0.14
PARPBPQ9NWS1 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PARPBPQ9NWS1 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC14.18□□□□□ -0.14
PARPBPQ9NWS1 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC14.18□□□□□ -0.14
PARPBPQ9NWS1 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PARPBPQ9NWS1 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PARPBPQ9NWS1 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PARPBPQ9NWS1 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
PARPBPQ9NWS1 MIR770-201ENST00000390219 98 ntBASIC14.18□□□□□ -0.14
PARPBPQ9NWS1 CENPM-205ENST00000404067 905 ntTSL 3 BASIC14.18□□□□□ -0.14
PARPBPQ9NWS1 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC14.18□□□□□ -0.14
PARPBPQ9NWS1 AL080243.2-201ENST00000418783 582 ntBASIC14.18□□□□□ -0.14
PARPBPQ9NWS1 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC14.18□□□□□ -0.14
PARPBPQ9NWS1 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC14.18□□□□□ -0.14
PARPBPQ9NWS1 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC14.18□□□□□ -0.14
PARPBPQ9NWS1 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
PARPBPQ9NWS1 PHKG1P2-201ENST00000457537 863 ntBASIC14.18□□□□□ -0.14
PARPBPQ9NWS1 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC14.18□□□□□ -0.14
PARPBPQ9NWS1 MPI-209ENST00000564003 1195 ntTSL 2 BASIC14.18□□□□□ -0.14
PARPBPQ9NWS1 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC14.18□□□□□ -0.14
PARPBPQ9NWS1 TEX28P1-201ENST00000613479 1221 ntBASIC14.18□□□□□ -0.14
PARPBPQ9NWS1 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC14.18□□□□□ -0.14
PARPBPQ9NWS1 TEX28P2-201ENST00000617764 1221 ntBASIC14.18□□□□□ -0.14
PARPBPQ9NWS1 AL590560.3-201ENST00000623350 461 ntBASIC14.18□□□□□ -0.14
PARPBPQ9NWS1 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
PARPBPQ9NWS1 AL033527.5-202ENST00000641632 1098 ntBASIC14.18□□□□□ -0.14
PARPBPQ9NWS1 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC14.18□□□□□ -0.14
PARPBPQ9NWS1 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC14.18□□□□□ -0.14
PARPBPQ9NWS1 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC14.18□□□□□ -0.14
PARPBPQ9NWS1 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
PARPBPQ9NWS1 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
PARPBPQ9NWS1 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
PARPBPQ9NWS1 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
PARPBPQ9NWS1 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
PARPBPQ9NWS1 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC14.18□□□□□ -0.14
PARPBPQ9NWS1 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC14.18□□□□□ -0.14
PARPBPQ9NWS1 REXO1L1P-202ENST00000608646 1974 ntBASIC14.18□□□□□ -0.14
PARPBPQ9NWS1 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PARPBPQ9NWS1 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC14.18□□□□□ -0.14
PARPBPQ9NWS1 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PARPBPQ9NWS1 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PARPBPQ9NWS1 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PARPBPQ9NWS1 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PARPBPQ9NWS1 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PARPBPQ9NWS1 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PARPBPQ9NWS1 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
PARPBPQ9NWS1 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PARPBPQ9NWS1 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
PARPBPQ9NWS1 BLK-205ENST00000529894 2017 ntTSL 5 BASIC14.17□□□□□ -0.14
PARPBPQ9NWS1 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
PARPBPQ9NWS1 AC100757.3-201ENST00000622361 1406 ntBASIC14.17□□□□□ -0.14
PARPBPQ9NWS1 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PARPBPQ9NWS1 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
PARPBPQ9NWS1 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PARPBPQ9NWS1 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PARPBPQ9NWS1 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
PARPBPQ9NWS1 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
PARPBPQ9NWS1 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PARPBPQ9NWS1 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
PARPBPQ9NWS1 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PARPBPQ9NWS1 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
PARPBPQ9NWS1 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PARPBPQ9NWS1 HNRNPA3P1-201ENST00000401429 1139 ntBASIC14.17□□□□□ -0.14
PARPBPQ9NWS1 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC14.17□□□□□ -0.14
PARPBPQ9NWS1 SYS1-203ENST00000414310 795 ntTSL 3 BASIC14.17□□□□□ -0.14
PARPBPQ9NWS1 AC092580.3-201ENST00000430932 139 ntBASIC14.17□□□□□ -0.14
PARPBPQ9NWS1 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC14.17□□□□□ -0.14
PARPBPQ9NWS1 HNRNPA3P5-201ENST00000455201 833 ntBASIC14.17□□□□□ -0.14
PARPBPQ9NWS1 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC14.17□□□□□ -0.14
PARPBPQ9NWS1 RN7SL618P-201ENST00000477850 296 ntBASIC14.17□□□□□ -0.14
PARPBPQ9NWS1 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC14.17□□□□□ -0.14
PARPBPQ9NWS1 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC14.17□□□□□ -0.14
PARPBPQ9NWS1 AC093214.1-201ENST00000511688 1107 ntBASIC14.17□□□□□ -0.14
PARPBPQ9NWS1 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC14.17□□□□□ -0.14
PARPBPQ9NWS1 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC14.17□□□□□ -0.14
PARPBPQ9NWS1 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
PARPBPQ9NWS1 AL450472.2-201ENST00000603663 1156 ntBASIC14.17□□□□□ -0.14
PARPBPQ9NWS1 AL390754.1-201ENST00000619088 582 ntBASIC14.17□□□□□ -0.14
PARPBPQ9NWS1 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC14.17□□□□□ -0.14
PARPBPQ9NWS1 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PARPBPQ9NWS1 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
PARPBPQ9NWS1 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
PARPBPQ9NWS1 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms