Protein–RNA interactions for Protein: Q9NWF4

SLC52A1, Solute carrier family 52, riboflavin transporter, member 1, humanhuman

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1Q9NWF4 HLA-DQB2-229ENST00000411527 1059 ntBASIC22.15■■□□□ 1.14
SLC52A1Q9NWF4 PTPA-217ENST00000434095 870 ntTSL 2 BASIC22.15■■□□□ 1.14
SLC52A1Q9NWF4 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC22.15■■□□□ 1.14
SLC52A1Q9NWF4 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC22.15■■□□□ 1.14
SLC52A1Q9NWF4 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC22.15■■□□□ 1.14
SLC52A1Q9NWF4 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC22.15■■□□□ 1.14
SLC52A1Q9NWF4 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC22.15■■□□□ 1.14
SLC52A1Q9NWF4 AC012313.1-201ENST00000593393 3059 ntBASIC22.15■■□□□ 1.14
SLC52A1Q9NWF4 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
SLC52A1Q9NWF4 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
SLC52A1Q9NWF4 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC22.15■■□□□ 1.14
SLC52A1Q9NWF4 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
SLC52A1Q9NWF4 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
SLC52A1Q9NWF4 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
SLC52A1Q9NWF4 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
SLC52A1Q9NWF4 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC22.15■■□□□ 1.14
SLC52A1Q9NWF4 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.14
SLC52A1Q9NWF4 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC22.14■■□□□ 1.14
SLC52A1Q9NWF4 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC22.14■■□□□ 1.14
SLC52A1Q9NWF4 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC22.14■■□□□ 1.14
SLC52A1Q9NWF4 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC22.14■■□□□ 1.14
SLC52A1Q9NWF4 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC22.14■■□□□ 1.14
SLC52A1Q9NWF4 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
SLC52A1Q9NWF4 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
SLC52A1Q9NWF4 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
SLC52A1Q9NWF4 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
SLC52A1Q9NWF4 AC084364.1-201ENST00000551967 1556 ntBASIC22.14■■□□□ 1.13
SLC52A1Q9NWF4 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
SLC52A1Q9NWF4 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC22.14■■□□□ 1.13
SLC52A1Q9NWF4 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC22.14■■□□□ 1.13
SLC52A1Q9NWF4 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC22.14■■□□□ 1.13
SLC52A1Q9NWF4 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC22.14■■□□□ 1.13
SLC52A1Q9NWF4 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC22.14■■□□□ 1.13
SLC52A1Q9NWF4 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
SLC52A1Q9NWF4 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC22.14■■□□□ 1.13
SLC52A1Q9NWF4 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC22.14■■□□□ 1.13
SLC52A1Q9NWF4 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC22.14■■□□□ 1.13
SLC52A1Q9NWF4 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC22.14■■□□□ 1.13
SLC52A1Q9NWF4 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.13
SLC52A1Q9NWF4 MIR6727-201ENST00000620702 65 ntBASIC22.14■■□□□ 1.13
SLC52A1Q9NWF4 AC100757.4-201ENST00000626934 759 ntBASIC22.14■■□□□ 1.13
SLC52A1Q9NWF4 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC22.14■■□□□ 1.13
SLC52A1Q9NWF4 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
SLC52A1Q9NWF4 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
SLC52A1Q9NWF4 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
SLC52A1Q9NWF4 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC22.14■■□□□ 1.13
SLC52A1Q9NWF4 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC22.14■■□□□ 1.13
SLC52A1Q9NWF4 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC22.14■■□□□ 1.13
SLC52A1Q9NWF4 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
SLC52A1Q9NWF4 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
SLC52A1Q9NWF4 KRT8P29-201ENST00000420409 1371 ntBASIC22.13■■□□□ 1.13
SLC52A1Q9NWF4 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC22.13■■□□□ 1.13
SLC52A1Q9NWF4 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC22.13■■□□□ 1.13
SLC52A1Q9NWF4 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC22.13■■□□□ 1.13
SLC52A1Q9NWF4 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
SLC52A1Q9NWF4 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
SLC52A1Q9NWF4 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC22.13■■□□□ 1.13
SLC52A1Q9NWF4 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
SLC52A1Q9NWF4 AC091046.1-201ENST00000331871 207 ntBASIC22.13■■□□□ 1.13
SLC52A1Q9NWF4 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC22.13■■□□□ 1.13
SLC52A1Q9NWF4 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC22.13■■□□□ 1.13
SLC52A1Q9NWF4 RPS2P36-201ENST00000456516 831 ntBASIC22.13■■□□□ 1.13
SLC52A1Q9NWF4 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC22.13■■□□□ 1.13
SLC52A1Q9NWF4 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC22.13■■□□□ 1.13
SLC52A1Q9NWF4 SAMD11P1-201ENST00000571429 661 ntBASIC22.13■■□□□ 1.13
SLC52A1Q9NWF4 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC22.13■■□□□ 1.13
SLC52A1Q9NWF4 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC22.13■■□□□ 1.13
SLC52A1Q9NWF4 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC22.13■■□□□ 1.13
SLC52A1Q9NWF4 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
SLC52A1Q9NWF4 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC22.13■■□□□ 1.13
SLC52A1Q9NWF4 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
SLC52A1Q9NWF4 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC22.13■■□□□ 1.13
SLC52A1Q9NWF4 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
SLC52A1Q9NWF4 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
SLC52A1Q9NWF4 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC22.13■■□□□ 1.13
SLC52A1Q9NWF4 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC22.13■■□□□ 1.13
SLC52A1Q9NWF4 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
SLC52A1Q9NWF4 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
SLC52A1Q9NWF4 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC22.13■■□□□ 1.13
SLC52A1Q9NWF4 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
SLC52A1Q9NWF4 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
SLC52A1Q9NWF4 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
SLC52A1Q9NWF4 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC22.12■■□□□ 1.13
SLC52A1Q9NWF4 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
SLC52A1Q9NWF4 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
SLC52A1Q9NWF4 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC22.12■■□□□ 1.13
SLC52A1Q9NWF4 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC22.12■■□□□ 1.13
SLC52A1Q9NWF4 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
SLC52A1Q9NWF4 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC22.12■■□□□ 1.13
SLC52A1Q9NWF4 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
SLC52A1Q9NWF4 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
SLC52A1Q9NWF4 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
SLC52A1Q9NWF4 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
SLC52A1Q9NWF4 CRCP-204ENST00000398684 492 ntTSL 2 BASIC22.12■■□□□ 1.13
SLC52A1Q9NWF4 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC22.12■■□□□ 1.13
SLC52A1Q9NWF4 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC22.12■■□□□ 1.13
SLC52A1Q9NWF4 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC22.12■■□□□ 1.13
SLC52A1Q9NWF4 AC005740.2-201ENST00000511085 419 ntBASIC22.12■■□□□ 1.13
SLC52A1Q9NWF4 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC22.12■■□□□ 1.13
SLC52A1Q9NWF4 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC22.12■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms