Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
FOXP3Q9BZS1 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
FOXP3Q9BZS1 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
FOXP3Q9BZS1 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
FOXP3Q9BZS1 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
FOXP3Q9BZS1 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
FOXP3Q9BZS1 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
FOXP3Q9BZS1 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
FOXP3Q9BZS1 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
FOXP3Q9BZS1 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC16.32■□□□□ 0.2
FOXP3Q9BZS1 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
FOXP3Q9BZS1 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC16.32■□□□□ 0.2
FOXP3Q9BZS1 AL035633.1-201ENST00000406139 838 ntBASIC16.32■□□□□ 0.2
FOXP3Q9BZS1 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC16.32■□□□□ 0.2
FOXP3Q9BZS1 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
FOXP3Q9BZS1 AL592309.1-201ENST00000443127 649 ntBASIC16.32■□□□□ 0.2
FOXP3Q9BZS1 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC16.32■□□□□ 0.2
FOXP3Q9BZS1 SLBP-205ENST00000488267 987 ntTSL 2 BASIC16.32■□□□□ 0.2
FOXP3Q9BZS1 AC079140.1-201ENST00000508039 487 ntBASIC16.32■□□□□ 0.2
FOXP3Q9BZS1 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
FOXP3Q9BZS1 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
FOXP3Q9BZS1 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
FOXP3Q9BZS1 FAM86C2P-203ENST00000528684 1004 ntBASIC16.32■□□□□ 0.2
FOXP3Q9BZS1 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC16.32■□□□□ 0.2
FOXP3Q9BZS1 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC16.32■□□□□ 0.2
FOXP3Q9BZS1 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC16.32■□□□□ 0.2
FOXP3Q9BZS1 PAM16-215ENST00000577031 548 ntTSL 4 BASIC16.32■□□□□ 0.2
FOXP3Q9BZS1 MIR4313-201ENST00000580760 101 ntBASIC16.32■□□□□ 0.2
FOXP3Q9BZS1 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC16.32■□□□□ 0.2
FOXP3Q9BZS1 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC16.32■□□□□ 0.2
FOXP3Q9BZS1 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC16.32■□□□□ 0.2
FOXP3Q9BZS1 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
FOXP3Q9BZS1 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC16.32■□□□□ 0.2
FOXP3Q9BZS1 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC16.32■□□□□ 0.2
FOXP3Q9BZS1 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC16.32■□□□□ 0.2
FOXP3Q9BZS1 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC16.32■□□□□ 0.2
FOXP3Q9BZS1 AC009093.7-201ENST00000623853 1223 ntBASIC16.32■□□□□ 0.2
FOXP3Q9BZS1 Z92544.3-201ENST00000624747 417 ntBASIC16.32■□□□□ 0.2
FOXP3Q9BZS1 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
FOXP3Q9BZS1 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
FOXP3Q9BZS1 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
FOXP3Q9BZS1 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
FOXP3Q9BZS1 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
FOXP3Q9BZS1 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC16.32■□□□□ 0.2
FOXP3Q9BZS1 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC16.32■□□□□ 0.2
FOXP3Q9BZS1 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
FOXP3Q9BZS1 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
FOXP3Q9BZS1 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
FOXP3Q9BZS1 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC16.31■□□□□ 0.2
FOXP3Q9BZS1 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
FOXP3Q9BZS1 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
FOXP3Q9BZS1 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
FOXP3Q9BZS1 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
FOXP3Q9BZS1 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC16.31■□□□□ 0.2
FOXP3Q9BZS1 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC16.31■□□□□ 0.2
FOXP3Q9BZS1 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC16.31■□□□□ 0.2
FOXP3Q9BZS1 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
FOXP3Q9BZS1 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
FOXP3Q9BZS1 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC16.31■□□□□ 0.2
FOXP3Q9BZS1 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
FOXP3Q9BZS1 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
FOXP3Q9BZS1 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC16.31■□□□□ 0.2
FOXP3Q9BZS1 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
FOXP3Q9BZS1 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC16.31■□□□□ 0.2
FOXP3Q9BZS1 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
FOXP3Q9BZS1 CICP24-201ENST00000605464 2705 ntBASIC16.31■□□□□ 0.2
FOXP3Q9BZS1 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
FOXP3Q9BZS1 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
FOXP3Q9BZS1 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
FOXP3Q9BZS1 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
FOXP3Q9BZS1 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
FOXP3Q9BZS1 TFAMP1-201ENST00000412727 736 ntBASIC16.31■□□□□ 0.2
FOXP3Q9BZS1 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
FOXP3Q9BZS1 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC16.31■□□□□ 0.2
FOXP3Q9BZS1 AC098859.1-201ENST00000502915 1238 ntBASIC16.31■□□□□ 0.2
FOXP3Q9BZS1 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC16.31■□□□□ 0.2
FOXP3Q9BZS1 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC16.31■□□□□ 0.2
FOXP3Q9BZS1 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
FOXP3Q9BZS1 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC16.31■□□□□ 0.2
FOXP3Q9BZS1 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
FOXP3Q9BZS1 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
FOXP3Q9BZS1 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC16.31■□□□□ 0.2
FOXP3Q9BZS1 AL161645.1-201ENST00000622716 1255 ntBASIC16.31■□□□□ 0.2
FOXP3Q9BZS1 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
FOXP3Q9BZS1 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
FOXP3Q9BZS1 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
FOXP3Q9BZS1 AC013726.1-201ENST00000563747 2285 ntBASIC16.31■□□□□ 0.2
FOXP3Q9BZS1 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
FOXP3Q9BZS1 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
FOXP3Q9BZS1 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
FOXP3Q9BZS1 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
FOXP3Q9BZS1 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC16.31■□□□□ 0.2
FOXP3Q9BZS1 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
FOXP3Q9BZS1 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
FOXP3Q9BZS1 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
FOXP3Q9BZS1 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
FOXP3Q9BZS1 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
FOXP3Q9BZS1 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
FOXP3Q9BZS1 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
FOXP3Q9BZS1 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 58.8 ms