Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 EEF1DP3-203ENST00000566025 782 ntBASIC10.1□□□□□ -0.79
KRTAP3-3Q9BYR6 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC10.1□□□□□ -0.79
KRTAP3-3Q9BYR6 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC10.1□□□□□ -0.79
KRTAP3-3Q9BYR6 AC008991.1-201ENST00000591285 537 ntTSL 4 BASIC10.1□□□□□ -0.79
KRTAP3-3Q9BYR6 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC10.1□□□□□ -0.79
KRTAP3-3Q9BYR6 AP001429.1-201ENST00000602568 530 ntBASIC10.1□□□□□ -0.79
KRTAP3-3Q9BYR6 AC024060.1-201ENST00000607052 494 ntBASIC10.1□□□□□ -0.79
KRTAP3-3Q9BYR6 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
KRTAP3-3Q9BYR6 AC124016.1-201ENST00000609552 612 ntBASIC10.1□□□□□ -0.79
KRTAP3-3Q9BYR6 SERPINB11-208ENST00000623262 918 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
KRTAP3-3Q9BYR6 AC135068.3-201ENST00000623441 1125 ntAPPRIS P1 BASIC10.1□□□□□ -0.79
KRTAP3-3Q9BYR6 AC138907.9-201ENST00000623747 986 ntBASIC10.1□□□□□ -0.79
KRTAP3-3Q9BYR6 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC10.1□□□□□ -0.79
KRTAP3-3Q9BYR6 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
KRTAP3-3Q9BYR6 ECHDC1-209ENST00000454591 1515 ntTSL 2 BASIC10.1□□□□□ -0.79
KRTAP3-3Q9BYR6 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC10.1□□□□□ -0.79
KRTAP3-3Q9BYR6 SPAG1-205ENST00000520508 1796 ntTSL 5 BASIC10.1□□□□□ -0.79
KRTAP3-3Q9BYR6 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
KRTAP3-3Q9BYR6 LINC00470-201ENST00000412816 2031 ntTSL 2 BASIC10.1□□□□□ -0.79
KRTAP3-3Q9BYR6 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
KRTAP3-3Q9BYR6 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
KRTAP3-3Q9BYR6 ZNF840P-201ENST00000504759 1996 ntBASIC10.1□□□□□ -0.79
KRTAP3-3Q9BYR6 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
KRTAP3-3Q9BYR6 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC10.1□□□□□ -0.79
KRTAP3-3Q9BYR6 RNF165-205ENST00000588679 2904 ntBASIC10.1□□□□□ -0.79
KRTAP3-3Q9BYR6 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
KRTAP3-3Q9BYR6 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
KRTAP3-3Q9BYR6 GALNT7-206ENST00000512285 1567 ntTSL 5 BASIC10.09□□□□□ -0.79
KRTAP3-3Q9BYR6 AC061975.6-201ENST00000579045 1553 ntBASIC10.09□□□□□ -0.79
KRTAP3-3Q9BYR6 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC10.09□□□□□ -0.79
KRTAP3-3Q9BYR6 TCF3P1-201ENST00000423021 1937 ntBASIC10.09□□□□□ -0.79
KRTAP3-3Q9BYR6 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC10.09□□□□□ -0.79
KRTAP3-3Q9BYR6 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
KRTAP3-3Q9BYR6 AL137918.1-201ENST00000624542 1922 ntBASIC10.09□□□□□ -0.79
KRTAP3-3Q9BYR6 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
KRTAP3-3Q9BYR6 DUOXA1-205ENST00000558422 1678 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
KRTAP3-3Q9BYR6 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
KRTAP3-3Q9BYR6 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC10.09□□□□□ -0.79
KRTAP3-3Q9BYR6 AC125238.2-201ENST00000430003 1440 ntBASIC10.09□□□□□ -0.79
KRTAP3-3Q9BYR6 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC10.09□□□□□ -0.79
KRTAP3-3Q9BYR6 VDAC2-214ENST00000543351 1424 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
KRTAP3-3Q9BYR6 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
KRTAP3-3Q9BYR6 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC10.09□□□□□ -0.79
KRTAP3-3Q9BYR6 RIOK3P1-201ENST00000418778 1528 ntBASIC10.09□□□□□ -0.79
KRTAP3-3Q9BYR6 RBMS3-209ENST00000452462 1547 ntAPPRIS ALT1 TSL 2 BASIC10.09□□□□□ -0.79
KRTAP3-3Q9BYR6 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
KRTAP3-3Q9BYR6 FETUB-201ENST00000265029 1627 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
KRTAP3-3Q9BYR6 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
KRTAP3-3Q9BYR6 CEP112-201ENST00000317442 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
KRTAP3-3Q9BYR6 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
KRTAP3-3Q9BYR6 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
KRTAP3-3Q9BYR6 Y_RNA.132-201ENST00000363421 102 ntBASIC10.09□□□□□ -0.79
KRTAP3-3Q9BYR6 Y_RNA.142-201ENST00000363491 102 ntBASIC10.09□□□□□ -0.79
KRTAP3-3Q9BYR6 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
KRTAP3-3Q9BYR6 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
KRTAP3-3Q9BYR6 SMIM21-201ENST00000382638 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
KRTAP3-3Q9BYR6 Y_RNA.419-201ENST00000384041 102 ntBASIC10.09□□□□□ -0.79
KRTAP3-3Q9BYR6 AL079342.2-201ENST00000403367 482 ntBASIC10.09□□□□□ -0.79
KRTAP3-3Q9BYR6 AL590084.1-201ENST00000407885 387 ntBASIC10.09□□□□□ -0.79
KRTAP3-3Q9BYR6 AC113618.1-201ENST00000416747 285 ntBASIC10.09□□□□□ -0.79
KRTAP3-3Q9BYR6 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC10.09□□□□□ -0.79
KRTAP3-3Q9BYR6 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC10.09□□□□□ -0.79
KRTAP3-3Q9BYR6 AC007742.1-201ENST00000425789 329 ntBASIC10.09□□□□□ -0.79
KRTAP3-3Q9BYR6 SRGAP3-AS3-201ENST00000432981 1223 ntTSL 2 BASIC10.09□□□□□ -0.79
KRTAP3-3Q9BYR6 ELOCP26-201ENST00000436067 329 ntBASIC10.09□□□□□ -0.79
KRTAP3-3Q9BYR6 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC10.09□□□□□ -0.79
KRTAP3-3Q9BYR6 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC10.09□□□□□ -0.79
KRTAP3-3Q9BYR6 PMCHL2-203ENST00000457791 237 ntBASIC10.09□□□□□ -0.79
KRTAP3-3Q9BYR6 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC10.09□□□□□ -0.79
KRTAP3-3Q9BYR6 ARL2BPP4-201ENST00000506854 471 ntBASIC10.09□□□□□ -0.79
KRTAP3-3Q9BYR6 AP003692.1-202ENST00000510185 502 ntTSL 3 BASIC10.09□□□□□ -0.79
KRTAP3-3Q9BYR6 TCP11X3P-202ENST00000514289 1254 ntBASIC10.09□□□□□ -0.79
KRTAP3-3Q9BYR6 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC10.09□□□□□ -0.79
KRTAP3-3Q9BYR6 FLJ46284-203ENST00000521230 407 ntTSL 3 BASIC10.09□□□□□ -0.79
KRTAP3-3Q9BYR6 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC10.09□□□□□ -0.79
KRTAP3-3Q9BYR6 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
KRTAP3-3Q9BYR6 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC10.09□□□□□ -0.79
KRTAP3-3Q9BYR6 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
KRTAP3-3Q9BYR6 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC10.09□□□□□ -0.79
KRTAP3-3Q9BYR6 AC011603.2-201ENST00000548149 675 ntTSL 3 BASIC10.09□□□□□ -0.79
KRTAP3-3Q9BYR6 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC10.09□□□□□ -0.79
KRTAP3-3Q9BYR6 AC121758.1-202ENST00000556917 658 ntBASIC10.09□□□□□ -0.79
KRTAP3-3Q9BYR6 AC020661.2-201ENST00000560114 134 ntBASIC10.09□□□□□ -0.79
KRTAP3-3Q9BYR6 ANP32BP1-201ENST00000564205 1297 ntBASIC10.09□□□□□ -0.79
KRTAP3-3Q9BYR6 PCMTD1P2-201ENST00000565017 355 ntBASIC10.09□□□□□ -0.79
KRTAP3-3Q9BYR6 AF067845.1-201ENST00000567210 1192 ntBASIC10.09□□□□□ -0.79
KRTAP3-3Q9BYR6 AC116025.1-201ENST00000575404 415 ntTSL 3 BASIC10.09□□□□□ -0.79
KRTAP3-3Q9BYR6 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC10.09□□□□□ -0.79
KRTAP3-3Q9BYR6 AC126544.1-201ENST00000580842 1059 ntBASIC10.09□□□□□ -0.79
KRTAP3-3Q9BYR6 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC10.09□□□□□ -0.79
KRTAP3-3Q9BYR6 PLIN5-202ENST00000586133 907 ntTSL 3 BASIC10.09□□□□□ -0.79
KRTAP3-3Q9BYR6 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC10.09□□□□□ -0.79
KRTAP3-3Q9BYR6 AC060780.3-201ENST00000589464 80 ntBASIC10.09□□□□□ -0.79
KRTAP3-3Q9BYR6 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC10.09□□□□□ -0.79
KRTAP3-3Q9BYR6 WISP1-OT1-201ENST00000602893 642 ntBASIC10.09□□□□□ -0.79
KRTAP3-3Q9BYR6 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC10.09□□□□□ -0.79
KRTAP3-3Q9BYR6 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
KRTAP3-3Q9BYR6 AL669831.3-201ENST00000634833 906 ntTSL 5 BASIC10.09□□□□□ -0.79
KRTAP3-3Q9BYR6 AL590396.3-201ENST00000636334 300 ntBASIC10.09□□□□□ -0.79
KRTAP3-3Q9BYR6 FAM157B-203ENST00000639350 358 ntBASIC10.09□□□□□ -0.79
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms