Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
COL21A1Q96P44 GOLGA8DP-202ENST00000341390 2184 ntBASIC14.97□□□□□ -0.01
COL21A1Q96P44 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
COL21A1Q96P44 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC14.97□□□□□ -0.01
COL21A1Q96P44 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
COL21A1Q96P44 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
COL21A1Q96P44 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
COL21A1Q96P44 C1R-202ENST00000536053 2347 ntTSL 2 BASIC14.97□□□□□ -0.01
COL21A1Q96P44 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
COL21A1Q96P44 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC14.96□□□□□ -0.01
COL21A1Q96P44 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC14.96□□□□□ -0.01
COL21A1Q96P44 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
COL21A1Q96P44 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
COL21A1Q96P44 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
COL21A1Q96P44 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
COL21A1Q96P44 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
COL21A1Q96P44 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
COL21A1Q96P44 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
COL21A1Q96P44 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC14.96□□□□□ -0.01
COL21A1Q96P44 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
COL21A1Q96P44 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
COL21A1Q96P44 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC14.96□□□□□ -0.01
COL21A1Q96P44 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
COL21A1Q96P44 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC14.96□□□□□ -0.01
COL21A1Q96P44 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
COL21A1Q96P44 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
COL21A1Q96P44 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
COL21A1Q96P44 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC14.96□□□□□ -0.01
COL21A1Q96P44 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC14.96□□□□□ -0.01
COL21A1Q96P44 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC14.96□□□□□ -0.01
COL21A1Q96P44 SPDYE14P-201ENST00000442619 822 ntBASIC14.96□□□□□ -0.01
COL21A1Q96P44 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
COL21A1Q96P44 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC14.96□□□□□ -0.01
COL21A1Q96P44 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC14.96□□□□□ -0.01
COL21A1Q96P44 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
COL21A1Q96P44 AC061975.2-201ENST00000581722 295 ntBASIC14.96□□□□□ -0.01
COL21A1Q96P44 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
COL21A1Q96P44 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
COL21A1Q96P44 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC14.96□□□□□ -0.01
COL21A1Q96P44 AC006486.2-201ENST00000624246 2199 ntBASIC14.96□□□□□ -0.01
COL21A1Q96P44 RAB34-224ENST00000636513 888 ntTSL 5 BASIC14.96□□□□□ -0.01
COL21A1Q96P44 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
COL21A1Q96P44 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
COL21A1Q96P44 AL009178.2-201ENST00000597278 2719 ntBASIC14.96□□□□□ -0.01
COL21A1Q96P44 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
COL21A1Q96P44 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
COL21A1Q96P44 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC14.96□□□□□ -0.01
COL21A1Q96P44 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
COL21A1Q96P44 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC14.96□□□□□ -0.02
COL21A1Q96P44 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC14.96□□□□□ -0.02
COL21A1Q96P44 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC14.96□□□□□ -0.02
COL21A1Q96P44 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
COL21A1Q96P44 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC14.96□□□□□ -0.02
COL21A1Q96P44 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
COL21A1Q96P44 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
COL21A1Q96P44 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC14.95□□□□□ -0.02
COL21A1Q96P44 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
COL21A1Q96P44 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC14.95□□□□□ -0.02
COL21A1Q96P44 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
COL21A1Q96P44 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
COL21A1Q96P44 KRT18P28-201ENST00000453838 1332 ntBASIC14.95□□□□□ -0.02
COL21A1Q96P44 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
COL21A1Q96P44 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
COL21A1Q96P44 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
COL21A1Q96P44 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
COL21A1Q96P44 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC14.95□□□□□ -0.02
COL21A1Q96P44 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC14.95□□□□□ -0.02
COL21A1Q96P44 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
COL21A1Q96P44 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC14.95□□□□□ -0.02
COL21A1Q96P44 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
COL21A1Q96P44 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
COL21A1Q96P44 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
COL21A1Q96P44 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
COL21A1Q96P44 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC14.95□□□□□ -0.02
COL21A1Q96P44 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
COL21A1Q96P44 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
COL21A1Q96P44 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
COL21A1Q96P44 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
COL21A1Q96P44 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
COL21A1Q96P44 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
COL21A1Q96P44 AL139400.1-201ENST00000366220 510 ntBASIC14.95□□□□□ -0.02
COL21A1Q96P44 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC14.95□□□□□ -0.02
COL21A1Q96P44 CD81-202ENST00000381036 880 ntTSL 3 BASIC14.95□□□□□ -0.02
COL21A1Q96P44 HNRNPFP1-201ENST00000391730 1133 ntBASIC14.95□□□□□ -0.02
COL21A1Q96P44 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
COL21A1Q96P44 SPDYE7P-202ENST00000420373 878 ntBASIC14.95□□□□□ -0.02
COL21A1Q96P44 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC14.95□□□□□ -0.02
COL21A1Q96P44 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
COL21A1Q96P44 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC14.95□□□□□ -0.02
COL21A1Q96P44 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC14.95□□□□□ -0.02
COL21A1Q96P44 AL512356.2-201ENST00000546955 174 ntBASIC14.95□□□□□ -0.02
COL21A1Q96P44 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
COL21A1Q96P44 MAX-210ENST00000555419 765 ntTSL 5 BASIC14.95□□□□□ -0.02
COL21A1Q96P44 AC025678.2-201ENST00000562061 970 ntBASIC14.95□□□□□ -0.02
COL21A1Q96P44 AC004449.1-201ENST00000564240 433 ntBASIC14.95□□□□□ -0.02
COL21A1Q96P44 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC14.95□□□□□ -0.02
COL21A1Q96P44 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC14.95□□□□□ -0.02
COL21A1Q96P44 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC14.95□□□□□ -0.02
COL21A1Q96P44 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC14.95□□□□□ -0.02
COL21A1Q96P44 AC018529.1-201ENST00000613063 361 ntBASIC14.95□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms