Protein–RNA interactions for Protein: Q96EP0

RNF31, E3 ubiquitin-protein ligase RNF31, humanhuman

Predictions only

Length 1,072 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF31Q96EP0 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC15.28■□□□□ 0.04
RNF31Q96EP0 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
RNF31Q96EP0 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RNF31Q96EP0 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RNF31Q96EP0 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RNF31Q96EP0 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
RNF31Q96EP0 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC15.27■□□□□ 0.04
RNF31Q96EP0 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
RNF31Q96EP0 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RNF31Q96EP0 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
RNF31Q96EP0 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC15.27■□□□□ 0.04
RNF31Q96EP0 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
RNF31Q96EP0 MBP-202ENST00000355994 2772 ntTSL 5 BASIC15.27■□□□□ 0.04
RNF31Q96EP0 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC15.27■□□□□ 0.04
RNF31Q96EP0 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
RNF31Q96EP0 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RNF31Q96EP0 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
RNF31Q96EP0 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
RNF31Q96EP0 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RNF31Q96EP0 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC15.27■□□□□ 0.04
RNF31Q96EP0 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC15.27■□□□□ 0.04
RNF31Q96EP0 SERBP1P3-201ENST00000459980 809 ntBASIC15.27■□□□□ 0.04
RNF31Q96EP0 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC15.27■□□□□ 0.04
RNF31Q96EP0 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RNF31Q96EP0 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC15.27■□□□□ 0.04
RNF31Q96EP0 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC15.27■□□□□ 0.04
RNF31Q96EP0 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC15.27■□□□□ 0.04
RNF31Q96EP0 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC15.27■□□□□ 0.04
RNF31Q96EP0 PAM16-215ENST00000577031 548 ntTSL 4 BASIC15.27■□□□□ 0.04
RNF31Q96EP0 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC15.27■□□□□ 0.04
RNF31Q96EP0 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC15.27■□□□□ 0.04
RNF31Q96EP0 LINC01115-203ENST00000606068 577 ntBASIC15.27■□□□□ 0.04
RNF31Q96EP0 AC026979.3-201ENST00000607315 403 ntBASIC15.27■□□□□ 0.04
RNF31Q96EP0 MIR8072-201ENST00000614241 80 ntBASIC15.27■□□□□ 0.04
RNF31Q96EP0 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
RNF31Q96EP0 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
RNF31Q96EP0 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
RNF31Q96EP0 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
RNF31Q96EP0 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RNF31Q96EP0 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
RNF31Q96EP0 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RNF31Q96EP0 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
RNF31Q96EP0 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC15.27■□□□□ 0.03
RNF31Q96EP0 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
RNF31Q96EP0 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
RNF31Q96EP0 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RNF31Q96EP0 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RNF31Q96EP0 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC15.27■□□□□ 0.03
RNF31Q96EP0 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC15.27■□□□□ 0.03
RNF31Q96EP0 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
RNF31Q96EP0 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RNF31Q96EP0 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RNF31Q96EP0 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RNF31Q96EP0 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RNF31Q96EP0 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RNF31Q96EP0 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC15.27■□□□□ 0.03
RNF31Q96EP0 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
RNF31Q96EP0 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
RNF31Q96EP0 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RNF31Q96EP0 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RNF31Q96EP0 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC15.26■□□□□ 0.03
RNF31Q96EP0 LINC01144-201ENST00000626198 1710 ntBASIC15.26■□□□□ 0.03
RNF31Q96EP0 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
RNF31Q96EP0 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RNF31Q96EP0 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RNF31Q96EP0 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RNF31Q96EP0 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC15.26■□□□□ 0.03
RNF31Q96EP0 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RNF31Q96EP0 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
RNF31Q96EP0 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
RNF31Q96EP0 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RNF31Q96EP0 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
RNF31Q96EP0 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
RNF31Q96EP0 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RNF31Q96EP0 AL353779.1-201ENST00000434793 351 ntBASIC15.26■□□□□ 0.03
RNF31Q96EP0 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC15.26■□□□□ 0.03
RNF31Q96EP0 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC15.26■□□□□ 0.03
RNF31Q96EP0 MYCLP2-201ENST00000449268 967 ntBASIC15.26■□□□□ 0.03
RNF31Q96EP0 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
RNF31Q96EP0 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC15.26■□□□□ 0.03
RNF31Q96EP0 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RNF31Q96EP0 NOP2-220ENST00000545915 630 ntTSL 2 BASIC15.26■□□□□ 0.03
RNF31Q96EP0 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RNF31Q96EP0 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RNF31Q96EP0 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RNF31Q96EP0 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
RNF31Q96EP0 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RNF31Q96EP0 AC104640.1-201ENST00000562617 2109 ntBASIC15.26■□□□□ 0.03
RNF31Q96EP0 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RNF31Q96EP0 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RNF31Q96EP0 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RNF31Q96EP0 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RNF31Q96EP0 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RNF31Q96EP0 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
RNF31Q96EP0 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RNF31Q96EP0 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
RNF31Q96EP0 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RNF31Q96EP0 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC15.26■□□□□ 0.03
RNF31Q96EP0 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RNF31Q96EP0 DBET-201ENST00000630918 3363 ntBASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms