Protein–RNA interactions for Protein: Q96B97

SH3KBP1, SH3 domain-containing kinase-binding protein 1, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1Q96B97 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SH3KBP1Q96B97 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SH3KBP1Q96B97 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC15.69■□□□□ 0.1
SH3KBP1Q96B97 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SH3KBP1Q96B97 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SH3KBP1Q96B97 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
SH3KBP1Q96B97 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
SH3KBP1Q96B97 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
SH3KBP1Q96B97 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC15.68■□□□□ 0.1
SH3KBP1Q96B97 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC15.68■□□□□ 0.1
SH3KBP1Q96B97 AL603832.2-201ENST00000566195 2125 ntBASIC15.68■□□□□ 0.1
SH3KBP1Q96B97 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
SH3KBP1Q96B97 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC15.68■□□□□ 0.1
SH3KBP1Q96B97 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
SH3KBP1Q96B97 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
SH3KBP1Q96B97 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
SH3KBP1Q96B97 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SH3KBP1Q96B97 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SH3KBP1Q96B97 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
SH3KBP1Q96B97 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SH3KBP1Q96B97 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
SH3KBP1Q96B97 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC15.68■□□□□ 0.1
SH3KBP1Q96B97 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SH3KBP1Q96B97 MIR661-201ENST00000384842 89 ntBASIC15.68■□□□□ 0.1
SH3KBP1Q96B97 HAUS4P1-201ENST00000406739 1145 ntBASIC15.68■□□□□ 0.1
SH3KBP1Q96B97 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC15.68■□□□□ 0.1
SH3KBP1Q96B97 GOLGA6L11P-201ENST00000417252 1298 ntBASIC15.68■□□□□ 0.1
SH3KBP1Q96B97 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC15.68■□□□□ 0.1
SH3KBP1Q96B97 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC15.68■□□□□ 0.1
SH3KBP1Q96B97 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC15.68■□□□□ 0.1
SH3KBP1Q96B97 STOM-203ENST00000538954 1257 ntTSL 5 BASIC15.68■□□□□ 0.1
SH3KBP1Q96B97 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
SH3KBP1Q96B97 AL033527.5-202ENST00000641632 1098 ntBASIC15.68■□□□□ 0.1
SH3KBP1Q96B97 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC15.68■□□□□ 0.1
SH3KBP1Q96B97 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
SH3KBP1Q96B97 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SH3KBP1Q96B97 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SH3KBP1Q96B97 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC15.68■□□□□ 0.1
SH3KBP1Q96B97 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
SH3KBP1Q96B97 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SH3KBP1Q96B97 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SH3KBP1Q96B97 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC15.68■□□□□ 0.1
SH3KBP1Q96B97 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
SH3KBP1Q96B97 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC15.68■□□□□ 0.1
SH3KBP1Q96B97 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
SH3KBP1Q96B97 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC15.68■□□□□ 0.1
SH3KBP1Q96B97 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SH3KBP1Q96B97 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SH3KBP1Q96B97 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SH3KBP1Q96B97 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SH3KBP1Q96B97 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SH3KBP1Q96B97 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SH3KBP1Q96B97 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SH3KBP1Q96B97 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SH3KBP1Q96B97 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SH3KBP1Q96B97 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
SH3KBP1Q96B97 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
SH3KBP1Q96B97 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC15.67■□□□□ 0.1
SH3KBP1Q96B97 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SH3KBP1Q96B97 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SH3KBP1Q96B97 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
SH3KBP1Q96B97 PCDHA3-202ENST00000532566 4594 ntBASIC15.67■□□□□ 0.1
SH3KBP1Q96B97 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SH3KBP1Q96B97 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SH3KBP1Q96B97 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
SH3KBP1Q96B97 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SH3KBP1Q96B97 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
SH3KBP1Q96B97 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SH3KBP1Q96B97 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
SH3KBP1Q96B97 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
SH3KBP1Q96B97 MIR648-201ENST00000385046 94 ntBASIC15.67■□□□□ 0.1
SH3KBP1Q96B97 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SH3KBP1Q96B97 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SH3KBP1Q96B97 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC15.67■□□□□ 0.1
SH3KBP1Q96B97 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SH3KBP1Q96B97 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC15.67■□□□□ 0.1
SH3KBP1Q96B97 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SH3KBP1Q96B97 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SH3KBP1Q96B97 AC009407.1-201ENST00000568958 598 ntBASIC15.67■□□□□ 0.1
SH3KBP1Q96B97 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SH3KBP1Q96B97 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SH3KBP1Q96B97 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SH3KBP1Q96B97 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC15.67■□□□□ 0.1
SH3KBP1Q96B97 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC15.67■□□□□ 0.1
SH3KBP1Q96B97 AL358472.5-202ENST00000641448 1267 ntBASIC15.67■□□□□ 0.1
SH3KBP1Q96B97 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SH3KBP1Q96B97 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC15.67■□□□□ 0.1
SH3KBP1Q96B97 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC15.67■□□□□ 0.1
SH3KBP1Q96B97 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SH3KBP1Q96B97 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC15.67■□□□□ 0.1
SH3KBP1Q96B97 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC15.67■□□□□ 0.1
SH3KBP1Q96B97 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SH3KBP1Q96B97 IMPDH1P4-201ENST00000445028 1534 ntBASIC15.67■□□□□ 0.1
SH3KBP1Q96B97 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SH3KBP1Q96B97 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC15.67■□□□□ 0.1
SH3KBP1Q96B97 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
SH3KBP1Q96B97 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC15.67■□□□□ 0.1
SH3KBP1Q96B97 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SH3KBP1Q96B97 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC15.67■□□□□ 0.1
SH3KBP1Q96B97 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms