Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
RTN4IP1Q8WWV3 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC13.34□□□□□ -0.27
RTN4IP1Q8WWV3 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
RTN4IP1Q8WWV3 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC13.34□□□□□ -0.27
RTN4IP1Q8WWV3 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
RTN4IP1Q8WWV3 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RTN4IP1Q8WWV3 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
RTN4IP1Q8WWV3 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
RTN4IP1Q8WWV3 AC007292.2-201ENST00000593524 1812 ntBASIC13.34□□□□□ -0.27
RTN4IP1Q8WWV3 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RTN4IP1Q8WWV3 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RTN4IP1Q8WWV3 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC13.34□□□□□ -0.27
RTN4IP1Q8WWV3 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC13.34□□□□□ -0.27
RTN4IP1Q8WWV3 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
RTN4IP1Q8WWV3 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
RTN4IP1Q8WWV3 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
RTN4IP1Q8WWV3 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC13.34□□□□□ -0.27
RTN4IP1Q8WWV3 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC13.34□□□□□ -0.27
RTN4IP1Q8WWV3 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC13.34□□□□□ -0.27
RTN4IP1Q8WWV3 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
RTN4IP1Q8WWV3 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
RTN4IP1Q8WWV3 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
RTN4IP1Q8WWV3 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
RTN4IP1Q8WWV3 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC13.34□□□□□ -0.27
RTN4IP1Q8WWV3 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
RTN4IP1Q8WWV3 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RTN4IP1Q8WWV3 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RTN4IP1Q8WWV3 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
RTN4IP1Q8WWV3 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
RTN4IP1Q8WWV3 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC13.34□□□□□ -0.27
RTN4IP1Q8WWV3 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC13.34□□□□□ -0.27
RTN4IP1Q8WWV3 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
RTN4IP1Q8WWV3 AL365330.1-201ENST00000607459 531 ntBASIC13.34□□□□□ -0.27
RTN4IP1Q8WWV3 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
RTN4IP1Q8WWV3 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
RTN4IP1Q8WWV3 AC091812.2-201ENST00000619081 385 ntBASIC13.34□□□□□ -0.27
RTN4IP1Q8WWV3 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC13.34□□□□□ -0.27
RTN4IP1Q8WWV3 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
RTN4IP1Q8WWV3 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
RTN4IP1Q8WWV3 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RTN4IP1Q8WWV3 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RTN4IP1Q8WWV3 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC13.34□□□□□ -0.27
RTN4IP1Q8WWV3 AC091951.1-201ENST00000512854 2465 ntBASIC13.34□□□□□ -0.27
RTN4IP1Q8WWV3 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
RTN4IP1Q8WWV3 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC13.34□□□□□ -0.27
RTN4IP1Q8WWV3 C18orf15-201ENST00000623680 2534 ntBASIC13.34□□□□□ -0.27
RTN4IP1Q8WWV3 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC13.34□□□□□ -0.27
RTN4IP1Q8WWV3 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RTN4IP1Q8WWV3 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
RTN4IP1Q8WWV3 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
RTN4IP1Q8WWV3 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC13.33□□□□□ -0.27
RTN4IP1Q8WWV3 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC13.33□□□□□ -0.27
RTN4IP1Q8WWV3 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC13.33□□□□□ -0.27
RTN4IP1Q8WWV3 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.27
RTN4IP1Q8WWV3 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
RTN4IP1Q8WWV3 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RTN4IP1Q8WWV3 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RTN4IP1Q8WWV3 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC13.33□□□□□ -0.28
RTN4IP1Q8WWV3 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RTN4IP1Q8WWV3 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
RTN4IP1Q8WWV3 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
RTN4IP1Q8WWV3 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC13.33□□□□□ -0.28
RTN4IP1Q8WWV3 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC13.33□□□□□ -0.28
RTN4IP1Q8WWV3 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC13.33□□□□□ -0.28
RTN4IP1Q8WWV3 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC13.33□□□□□ -0.28
RTN4IP1Q8WWV3 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
RTN4IP1Q8WWV3 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
RTN4IP1Q8WWV3 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
RTN4IP1Q8WWV3 AC112693.3-201ENST00000624819 1983 ntBASIC13.33□□□□□ -0.28
RTN4IP1Q8WWV3 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
RTN4IP1Q8WWV3 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
RTN4IP1Q8WWV3 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
RTN4IP1Q8WWV3 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RTN4IP1Q8WWV3 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RTN4IP1Q8WWV3 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC13.33□□□□□ -0.28
RTN4IP1Q8WWV3 FABP5-202ENST00000396359 986 ntTSL 5 BASIC13.33□□□□□ -0.28
RTN4IP1Q8WWV3 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
RTN4IP1Q8WWV3 MCCD1P2-201ENST00000423228 335 ntBASIC13.33□□□□□ -0.28
RTN4IP1Q8WWV3 AC093724.1-201ENST00000448659 1027 ntBASIC13.33□□□□□ -0.28
RTN4IP1Q8WWV3 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
RTN4IP1Q8WWV3 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC13.33□□□□□ -0.28
RTN4IP1Q8WWV3 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC13.33□□□□□ -0.28
RTN4IP1Q8WWV3 QPRT-203ENST00000562473 579 ntTSL 3 BASIC13.33□□□□□ -0.28
RTN4IP1Q8WWV3 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC13.33□□□□□ -0.28
RTN4IP1Q8WWV3 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
RTN4IP1Q8WWV3 AL671883.3-201ENST00000603274 991 ntBASIC13.33□□□□□ -0.28
RTN4IP1Q8WWV3 AC099522.2-201ENST00000607001 744 ntBASIC13.33□□□□□ -0.28
RTN4IP1Q8WWV3 SNX18-202ENST00000343017 3140 ntBASIC13.33□□□□□ -0.28
RTN4IP1Q8WWV3 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
RTN4IP1Q8WWV3 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RTN4IP1Q8WWV3 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RTN4IP1Q8WWV3 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
RTN4IP1Q8WWV3 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RTN4IP1Q8WWV3 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RTN4IP1Q8WWV3 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC13.33□□□□□ -0.28
RTN4IP1Q8WWV3 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RTN4IP1Q8WWV3 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RTN4IP1Q8WWV3 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RTN4IP1Q8WWV3 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC13.33□□□□□ -0.28
RTN4IP1Q8WWV3 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC13.33□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms