Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SNED1Q8TER0 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC18.84■□□□□ 0.61
SNED1Q8TER0 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC18.84■□□□□ 0.61
SNED1Q8TER0 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.84■□□□□ 0.61
SNED1Q8TER0 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SNED1Q8TER0 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
SNED1Q8TER0 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SNED1Q8TER0 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SNED1Q8TER0 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
SNED1Q8TER0 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SNED1Q8TER0 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC18.84■□□□□ 0.61
SNED1Q8TER0 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SNED1Q8TER0 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
SNED1Q8TER0 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC18.84■□□□□ 0.61
SNED1Q8TER0 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
SNED1Q8TER0 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SNED1Q8TER0 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC18.83■□□□□ 0.61
SNED1Q8TER0 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SNED1Q8TER0 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SNED1Q8TER0 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SNED1Q8TER0 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
SNED1Q8TER0 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
SNED1Q8TER0 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC18.83■□□□□ 0.61
SNED1Q8TER0 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC18.83■□□□□ 0.61
SNED1Q8TER0 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SNED1Q8TER0 LSM5-207ENST00000410044 687 ntTSL 3 BASIC18.83■□□□□ 0.61
SNED1Q8TER0 HLA-DQB2-229ENST00000411527 1059 ntBASIC18.83■□□□□ 0.61
SNED1Q8TER0 ACTG1P2-201ENST00000415776 1125 ntBASIC18.83■□□□□ 0.61
SNED1Q8TER0 ACTG1P11-201ENST00000425411 1125 ntBASIC18.83■□□□□ 0.61
SNED1Q8TER0 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC18.83■□□□□ 0.61
SNED1Q8TER0 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SNED1Q8TER0 LDHBP1-201ENST00000455730 1119 ntBASIC18.83■□□□□ 0.61
SNED1Q8TER0 COX5BP1-201ENST00000507622 393 ntBASIC18.83■□□□□ 0.61
SNED1Q8TER0 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC18.83■□□□□ 0.61
SNED1Q8TER0 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC18.83■□□□□ 0.61
SNED1Q8TER0 FGFR3P5-201ENST00000564496 886 ntBASIC18.83■□□□□ 0.61
SNED1Q8TER0 MIR4783-201ENST00000580343 82 ntBASIC18.83■□□□□ 0.61
SNED1Q8TER0 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.61
SNED1Q8TER0 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC18.83■□□□□ 0.61
SNED1Q8TER0 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
SNED1Q8TER0 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC18.83■□□□□ 0.61
SNED1Q8TER0 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC18.83■□□□□ 0.61
SNED1Q8TER0 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC18.83■□□□□ 0.61
SNED1Q8TER0 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC18.83■□□□□ 0.61
SNED1Q8TER0 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
SNED1Q8TER0 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SNED1Q8TER0 AC008132.1-202ENST00000342005 1389 ntBASIC18.83■□□□□ 0.61
SNED1Q8TER0 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SNED1Q8TER0 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
SNED1Q8TER0 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SNED1Q8TER0 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC18.83■□□□□ 0.6
SNED1Q8TER0 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC18.83■□□□□ 0.6
SNED1Q8TER0 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SNED1Q8TER0 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
SNED1Q8TER0 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SNED1Q8TER0 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC18.83■□□□□ 0.6
SNED1Q8TER0 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SNED1Q8TER0 AL662844.4-201ENST00000606367 2838 ntBASIC18.83■□□□□ 0.6
SNED1Q8TER0 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SNED1Q8TER0 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SNED1Q8TER0 TPM3P8-201ENST00000330554 643 ntBASIC18.83■□□□□ 0.6
SNED1Q8TER0 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC18.83■□□□□ 0.6
SNED1Q8TER0 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC18.83■□□□□ 0.6
SNED1Q8TER0 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SNED1Q8TER0 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SNED1Q8TER0 FAM8A4P-201ENST00000435433 1213 ntBASIC18.83■□□□□ 0.6
SNED1Q8TER0 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SNED1Q8TER0 AL391280.1-201ENST00000506969 1062 ntBASIC18.83■□□□□ 0.6
SNED1Q8TER0 FADS2-212ENST00000522639 360 ntTSL 5 BASIC18.83■□□□□ 0.6
SNED1Q8TER0 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC18.83■□□□□ 0.6
SNED1Q8TER0 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC18.83■□□□□ 0.6
SNED1Q8TER0 FADS2-215ENST00000574708 385 ntTSL 3 BASIC18.83■□□□□ 0.6
SNED1Q8TER0 ZACNP1-201ENST00000612259 710 ntBASIC18.83■□□□□ 0.6
SNED1Q8TER0 AP001002.3-201ENST00000623482 206 ntBASIC18.83■□□□□ 0.6
SNED1Q8TER0 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC18.82■□□□□ 0.6
SNED1Q8TER0 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SNED1Q8TER0 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SNED1Q8TER0 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SNED1Q8TER0 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC18.82■□□□□ 0.6
SNED1Q8TER0 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SNED1Q8TER0 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SNED1Q8TER0 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
SNED1Q8TER0 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC18.82■□□□□ 0.6
SNED1Q8TER0 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SNED1Q8TER0 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SNED1Q8TER0 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SNED1Q8TER0 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
SNED1Q8TER0 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
SNED1Q8TER0 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SNED1Q8TER0 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC18.82■□□□□ 0.6
SNED1Q8TER0 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
SNED1Q8TER0 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SNED1Q8TER0 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC18.82■□□□□ 0.6
SNED1Q8TER0 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC18.82■□□□□ 0.6
SNED1Q8TER0 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
SNED1Q8TER0 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SNED1Q8TER0 ATP6V0CP2-201ENST00000469409 207 ntBASIC18.82■□□□□ 0.6
SNED1Q8TER0 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC18.82■□□□□ 0.6
SNED1Q8TER0 AC024681.1-201ENST00000521917 487 ntBASIC18.82■□□□□ 0.6
SNED1Q8TER0 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms