Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
ALMS1Q8TCU4 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC10.33□□□□□ -0.76
ALMS1Q8TCU4 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
ALMS1Q8TCU4 C8G-201ENST00000224181 855 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
ALMS1Q8TCU4 AC239868.1-201ENST00000369385 493 ntBASIC10.33□□□□□ -0.76
ALMS1Q8TCU4 MIR557-201ENST00000385239 98 ntBASIC10.33□□□□□ -0.76
ALMS1Q8TCU4 AL512430.1-201ENST00000392575 860 ntBASIC10.33□□□□□ -0.76
ALMS1Q8TCU4 AC012379.2-201ENST00000560237 765 ntTSL 2 BASIC10.33□□□□□ -0.76
ALMS1Q8TCU4 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC10.33□□□□□ -0.76
ALMS1Q8TCU4 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC10.33□□□□□ -0.76
ALMS1Q8TCU4 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC10.33□□□□□ -0.76
ALMS1Q8TCU4 AC104333.4-201ENST00000632866 554 ntTSL 3 BASIC10.33□□□□□ -0.76
ALMS1Q8TCU4 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC10.33□□□□□ -0.76
ALMS1Q8TCU4 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC10.33□□□□□ -0.76
ALMS1Q8TCU4 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC10.33□□□□□ -0.76
ALMS1Q8TCU4 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
ALMS1Q8TCU4 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC10.33□□□□□ -0.76
ALMS1Q8TCU4 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC10.33□□□□□ -0.76
ALMS1Q8TCU4 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
ALMS1Q8TCU4 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
ALMS1Q8TCU4 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
ALMS1Q8TCU4 AL357563.1-201ENST00000404728 395 ntBASIC10.33□□□□□ -0.76
ALMS1Q8TCU4 AL365436.2-201ENST00000434112 526 ntTSL 4 BASIC10.33□□□□□ -0.76
ALMS1Q8TCU4 DDX39AP1-201ENST00000445147 1181 ntBASIC10.33□□□□□ -0.76
ALMS1Q8TCU4 ANXA5-210ENST00000515017 1190 ntTSL 5 BASIC10.33□□□□□ -0.76
ALMS1Q8TCU4 PIGT-208ENST00000545755 1158 ntTSL 5 BASIC10.33□□□□□ -0.76
ALMS1Q8TCU4 ZSCAN10-205ENST00000572548 618 ntTSL 3 BASIC10.33□□□□□ -0.76
ALMS1Q8TCU4 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
ALMS1Q8TCU4 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
ALMS1Q8TCU4 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
ALMS1Q8TCU4 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
ALMS1Q8TCU4 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC10.32□□□□□ -0.76
ALMS1Q8TCU4 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC10.32□□□□□ -0.76
ALMS1Q8TCU4 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
ALMS1Q8TCU4 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC10.32□□□□□ -0.76
ALMS1Q8TCU4 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
ALMS1Q8TCU4 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
ALMS1Q8TCU4 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC10.32□□□□□ -0.76
ALMS1Q8TCU4 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC10.32□□□□□ -0.76
ALMS1Q8TCU4 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC10.32□□□□□ -0.76
ALMS1Q8TCU4 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
ALMS1Q8TCU4 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
ALMS1Q8TCU4 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
ALMS1Q8TCU4 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
ALMS1Q8TCU4 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
ALMS1Q8TCU4 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
ALMS1Q8TCU4 INS-IGF2-202ENST00000397270 828 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
ALMS1Q8TCU4 PSMA1-202ENST00000418988 1266 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
ALMS1Q8TCU4 HLA-J-204ENST00000495278 958 ntBASIC10.32□□□□□ -0.76
ALMS1Q8TCU4 ZNF124-206ENST00000543802 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
ALMS1Q8TCU4 AL118516.1-201ENST00000564152 670 ntBASIC10.32□□□□□ -0.76
ALMS1Q8TCU4 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
ALMS1Q8TCU4 FAM168A-204ENST00000450446 1364 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
ALMS1Q8TCU4 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
ALMS1Q8TCU4 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
ALMS1Q8TCU4 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC10.32□□□□□ -0.76
ALMS1Q8TCU4 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
ALMS1Q8TCU4 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
ALMS1Q8TCU4 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC10.32□□□□□ -0.76
ALMS1Q8TCU4 MIR4522-201ENST00000584932 87 ntBASIC10.32□□□□□ -0.76
ALMS1Q8TCU4 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC10.32□□□□□ -0.76
ALMS1Q8TCU4 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC10.32□□□□□ -0.76
ALMS1Q8TCU4 Z98259.2-201ENST00000641583 609 ntBASIC10.32□□□□□ -0.76
ALMS1Q8TCU4 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC10.32□□□□□ -0.76
ALMS1Q8TCU4 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC10.32□□□□□ -0.76
ALMS1Q8TCU4 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
ALMS1Q8TCU4 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
ALMS1Q8TCU4 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
ALMS1Q8TCU4 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
ALMS1Q8TCU4 LINC01433-201ENST00000419003 697 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
ALMS1Q8TCU4 AL008733.1-201ENST00000440516 469 ntTSL 3 BASIC10.32□□□□□ -0.76
ALMS1Q8TCU4 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC10.32□□□□□ -0.76
ALMS1Q8TCU4 RN7SL596P-201ENST00000582123 288 ntBASIC10.32□□□□□ -0.76
ALMS1Q8TCU4 MBLAC2-202ENST00000514906 1936 ntBASIC10.32□□□□□ -0.76
ALMS1Q8TCU4 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC10.32□□□□□ -0.76
ALMS1Q8TCU4 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC10.32□□□□□ -0.76
ALMS1Q8TCU4 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
ALMS1Q8TCU4 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
ALMS1Q8TCU4 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
ALMS1Q8TCU4 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC10.31□□□□□ -0.76
ALMS1Q8TCU4 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
ALMS1Q8TCU4 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC10.31□□□□□ -0.76
ALMS1Q8TCU4 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC10.31□□□□□ -0.76
ALMS1Q8TCU4 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
ALMS1Q8TCU4 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC10.31□□□□□ -0.76
ALMS1Q8TCU4 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC10.31□□□□□ -0.76
ALMS1Q8TCU4 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
ALMS1Q8TCU4 SPACA3-201ENST00000269053 817 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
ALMS1Q8TCU4 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
ALMS1Q8TCU4 HLA-K-203ENST00000430151 1046 ntBASIC10.31□□□□□ -0.76
ALMS1Q8TCU4 VDAC1P1-201ENST00000439229 848 ntBASIC10.31□□□□□ -0.76
ALMS1Q8TCU4 LINC01056-201ENST00000455711 1234 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
ALMS1Q8TCU4 SH3BGR-209ENST00000458295 812 ntTSL 3 BASIC10.31□□□□□ -0.76
ALMS1Q8TCU4 RBM8B-201ENST00000555532 525 ntBASIC10.31□□□□□ -0.76
ALMS1Q8TCU4 SPACA3-205ENST00000580599 949 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
ALMS1Q8TCU4 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC10.31□□□□□ -0.76
ALMS1Q8TCU4 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
ALMS1Q8TCU4 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
ALMS1Q8TCU4 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
ALMS1Q8TCU4 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Retrieved 100 of 98,524 protein–RNA pairs in 67.5 ms