Protein–RNA interactions for Protein: Q8TCT0

CERK, Ceramide kinase, humanhuman

Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CERKQ8TCT0 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC21.14■□□□□ 0.98
CERKQ8TCT0 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC21.14■□□□□ 0.98
CERKQ8TCT0 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC21.14■□□□□ 0.97
CERKQ8TCT0 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
CERKQ8TCT0 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CERKQ8TCT0 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC21.14■□□□□ 0.97
CERKQ8TCT0 PCBD1-201ENST00000299299 1006 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CERKQ8TCT0 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CERKQ8TCT0 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CERKQ8TCT0 IL37-204ENST00000352179 709 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
CERKQ8TCT0 PRELID3B-202ENST00000371033 943 ntTSL 2 BASIC21.14■□□□□ 0.97
CERKQ8TCT0 IFNA2-201ENST00000380206 1135 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
CERKQ8TCT0 CYB561D1-203ENST00000393709 620 ntAPPRIS ALT1 TSL 4 BASIC21.14■□□□□ 0.97
CERKQ8TCT0 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
CERKQ8TCT0 DDX39B-AS1-208ENST00000420520 516 ntTSL 3 BASIC21.14■□□□□ 0.97
CERKQ8TCT0 VENTXP4-201ENST00000449029 958 ntBASIC21.14■□□□□ 0.97
CERKQ8TCT0 RPL9-203ENST00000449470 1127 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CERKQ8TCT0 AL451000.1-201ENST00000451300 1186 ntBASIC21.14■□□□□ 0.97
CERKQ8TCT0 RN7SL582P-201ENST00000491078 279 ntBASIC21.14■□□□□ 0.97
CERKQ8TCT0 IKBKB-223ENST00000522147 954 ntTSL 5 BASIC21.14■□□□□ 0.97
CERKQ8TCT0 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CERKQ8TCT0 LINC01588-216ENST00000623502 975 ntTSL 2 BASIC21.14■□□□□ 0.97
CERKQ8TCT0 PROX1-AS1-235ENST00000628896 711 ntTSL 5 BASIC21.14■□□□□ 0.97
CERKQ8TCT0 OSMR-AS1-204ENST00000636516 850 ntTSL 5 BASIC21.14■□□□□ 0.97
CERKQ8TCT0 AC244394.1-201ENST00000435000 1665 ntBASIC21.14■□□□□ 0.97
CERKQ8TCT0 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC21.14■□□□□ 0.97
CERKQ8TCT0 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CERKQ8TCT0 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC21.14■□□□□ 0.97
CERKQ8TCT0 ERICH1-206ENST00000522706 1551 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
CERKQ8TCT0 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
CERKQ8TCT0 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC21.14■□□□□ 0.97
CERKQ8TCT0 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
CERKQ8TCT0 AC098818.2-201ENST00000564925 2320 ntBASIC21.13■□□□□ 0.97
CERKQ8TCT0 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CERKQ8TCT0 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CERKQ8TCT0 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CERKQ8TCT0 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CERKQ8TCT0 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CERKQ8TCT0 FKBP4P6-201ENST00000457486 1332 ntBASIC21.13■□□□□ 0.97
CERKQ8TCT0 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC21.13■□□□□ 0.97
CERKQ8TCT0 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
CERKQ8TCT0 BABAM2-204ENST00000379624 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CERKQ8TCT0 MAPK3-204ENST00000395200 997 ntTSL 3 BASIC21.13■□□□□ 0.97
CERKQ8TCT0 AL035413.1-201ENST00000437898 507 ntTSL 2 BASIC21.13■□□□□ 0.97
CERKQ8TCT0 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CERKQ8TCT0 TGFBI-207ENST00000508076 1034 ntTSL 2 BASIC21.13■□□□□ 0.97
CERKQ8TCT0 AC005962.1-201ENST00000584100 773 ntBASIC21.13■□□□□ 0.97
CERKQ8TCT0 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC21.13■□□□□ 0.97
CERKQ8TCT0 AC011451.3-201ENST00000634951 582 ntTSL 3 BASIC21.13■□□□□ 0.97
CERKQ8TCT0 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CERKQ8TCT0 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CERKQ8TCT0 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
CERKQ8TCT0 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
CERKQ8TCT0 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC21.13■□□□□ 0.97
CERKQ8TCT0 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CERKQ8TCT0 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CERKQ8TCT0 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CERKQ8TCT0 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC21.13■□□□□ 0.97
CERKQ8TCT0 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC21.13■□□□□ 0.97
CERKQ8TCT0 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CERKQ8TCT0 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CERKQ8TCT0 MIR3936HG-204ENST00000621103 1793 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CERKQ8TCT0 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
CERKQ8TCT0 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC21.12■□□□□ 0.97
CERKQ8TCT0 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CERKQ8TCT0 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
CERKQ8TCT0 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CERKQ8TCT0 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC21.12■□□□□ 0.97
CERKQ8TCT0 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CERKQ8TCT0 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CERKQ8TCT0 SPATS1-202ENST00000323108 1107 ntAPPRIS P2 TSL 5 BASIC21.12■□□□□ 0.97
CERKQ8TCT0 AC106827.1-201ENST00000366454 431 ntBASIC21.12■□□□□ 0.97
CERKQ8TCT0 RBM38-204ENST00000371219 760 ntTSL 2 BASIC21.12■□□□□ 0.97
CERKQ8TCT0 IGHV5-51-201ENST00000390626 410 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
CERKQ8TCT0 AHCYP3-201ENST00000420053 1279 ntBASIC21.12■□□□□ 0.97
CERKQ8TCT0 AC034228.2-201ENST00000432558 459 ntTSL 3 BASIC21.12■□□□□ 0.97
CERKQ8TCT0 PGAP2-207ENST00000463452 931 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
CERKQ8TCT0 GOLGA2P7-209ENST00000560408 745 ntBASIC21.12■□□□□ 0.97
CERKQ8TCT0 AC007952.4-201ENST00000573866 637 ntBASIC21.12■□□□□ 0.97
CERKQ8TCT0 AC004466.1-201ENST00000599515 1080 ntBASIC21.12■□□□□ 0.97
CERKQ8TCT0 SELENOW-212ENST00000601048 888 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CERKQ8TCT0 MIR6893-201ENST00000613458 69 ntBASIC21.12■□□□□ 0.97
CERKQ8TCT0 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC21.12■□□□□ 0.97
CERKQ8TCT0 AL603764.1-201ENST00000636452 321 ntBASIC21.12■□□□□ 0.97
CERKQ8TCT0 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
CERKQ8TCT0 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CERKQ8TCT0 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
CERKQ8TCT0 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
CERKQ8TCT0 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
CERKQ8TCT0 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC21.12■□□□□ 0.97
CERKQ8TCT0 CNBP-201ENST00000422453 1664 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
CERKQ8TCT0 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
CERKQ8TCT0 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
CERKQ8TCT0 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
CERKQ8TCT0 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CERKQ8TCT0 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CERKQ8TCT0 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC21.11■□□□□ 0.97
CERKQ8TCT0 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
CERKQ8TCT0 KCTD6-202ENST00000404589 1533 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
CERKQ8TCT0 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC21.11■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms