Protein–RNA interactions for Protein: Q8NHY2

RFWD2, E3 ubiquitin-protein ligase RFWD2, humanhuman

Predictions only

Length 731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD2Q8NHY2 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC15.67■□□□□ 0.1
RFWD2Q8NHY2 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
RFWD2Q8NHY2 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC15.66■□□□□ 0.1
RFWD2Q8NHY2 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RFWD2Q8NHY2 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RFWD2Q8NHY2 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RFWD2Q8NHY2 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC15.66■□□□□ 0.1
RFWD2Q8NHY2 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
RFWD2Q8NHY2 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RFWD2Q8NHY2 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
RFWD2Q8NHY2 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
RFWD2Q8NHY2 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RFWD2Q8NHY2 PCDHA3-202ENST00000532566 4594 ntBASIC15.66■□□□□ 0.1
RFWD2Q8NHY2 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RFWD2Q8NHY2 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RFWD2Q8NHY2 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RFWD2Q8NHY2 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC15.66■□□□□ 0.1
RFWD2Q8NHY2 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
RFWD2Q8NHY2 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC15.66■□□□□ 0.1
RFWD2Q8NHY2 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RFWD2Q8NHY2 GPX1P2-201ENST00000429271 606 ntBASIC15.66■□□□□ 0.1
RFWD2Q8NHY2 RNPS1P1-201ENST00000507437 918 ntBASIC15.66■□□□□ 0.1
RFWD2Q8NHY2 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC15.66■□□□□ 0.1
RFWD2Q8NHY2 OR7E14P-202ENST00000530490 1290 ntBASIC15.66■□□□□ 0.1
RFWD2Q8NHY2 CIPC-205ENST00000555437 566 ntTSL 3 BASIC15.66■□□□□ 0.1
RFWD2Q8NHY2 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC15.66■□□□□ 0.1
RFWD2Q8NHY2 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC15.66■□□□□ 0.1
RFWD2Q8NHY2 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RFWD2Q8NHY2 OR7E47P-204ENST00000575924 449 ntBASIC15.66■□□□□ 0.1
RFWD2Q8NHY2 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC15.66■□□□□ 0.1
RFWD2Q8NHY2 AC008667.4-201ENST00000607370 168 ntBASIC15.66■□□□□ 0.1
RFWD2Q8NHY2 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC15.66■□□□□ 0.1
RFWD2Q8NHY2 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC15.66■□□□□ 0.1
RFWD2Q8NHY2 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RFWD2Q8NHY2 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RFWD2Q8NHY2 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RFWD2Q8NHY2 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RFWD2Q8NHY2 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RFWD2Q8NHY2 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC15.66■□□□□ 0.1
RFWD2Q8NHY2 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
RFWD2Q8NHY2 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
RFWD2Q8NHY2 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RFWD2Q8NHY2 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RFWD2Q8NHY2 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RFWD2Q8NHY2 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC15.66■□□□□ 0.1
RFWD2Q8NHY2 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
RFWD2Q8NHY2 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
RFWD2Q8NHY2 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
RFWD2Q8NHY2 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RFWD2Q8NHY2 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC15.65■□□□□ 0.1
RFWD2Q8NHY2 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RFWD2Q8NHY2 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RFWD2Q8NHY2 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
RFWD2Q8NHY2 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
RFWD2Q8NHY2 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RFWD2Q8NHY2 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RFWD2Q8NHY2 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC15.65■□□□□ 0.1
RFWD2Q8NHY2 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC15.65■□□□□ 0.1
RFWD2Q8NHY2 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RFWD2Q8NHY2 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RFWD2Q8NHY2 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC15.65■□□□□ 0.1
RFWD2Q8NHY2 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RFWD2Q8NHY2 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RFWD2Q8NHY2 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RFWD2Q8NHY2 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
RFWD2Q8NHY2 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
RFWD2Q8NHY2 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC15.65■□□□□ 0.1
RFWD2Q8NHY2 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC15.65■□□□□ 0.1
RFWD2Q8NHY2 PMS2P4-201ENST00000412466 1052 ntBASIC15.65■□□□□ 0.1
RFWD2Q8NHY2 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC15.65■□□□□ 0.1
RFWD2Q8NHY2 LAGE3P1-201ENST00000425356 484 ntBASIC15.65■□□□□ 0.1
RFWD2Q8NHY2 KRT18P27-201ENST00000427733 1299 ntBASIC15.65■□□□□ 0.1
RFWD2Q8NHY2 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RFWD2Q8NHY2 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
RFWD2Q8NHY2 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC15.65■□□□□ 0.1
RFWD2Q8NHY2 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC15.65■□□□□ 0.1
RFWD2Q8NHY2 MIR3909-201ENST00000579518 119 ntBASIC15.65■□□□□ 0.1
RFWD2Q8NHY2 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC15.65■□□□□ 0.1
RFWD2Q8NHY2 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC15.65■□□□□ 0.1
RFWD2Q8NHY2 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC15.65■□□□□ 0.1
RFWD2Q8NHY2 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RFWD2Q8NHY2 ABR-228ENST00000574437 3196 ntTSL 5 BASIC15.65■□□□□ 0.1
RFWD2Q8NHY2 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
RFWD2Q8NHY2 STRN-202ENST00000379213 2254 ntTSL 5 BASIC15.65■□□□□ 0.1
RFWD2Q8NHY2 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
RFWD2Q8NHY2 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC15.65■□□□□ 0.1
RFWD2Q8NHY2 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC15.65■□□□□ 0.1
RFWD2Q8NHY2 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
RFWD2Q8NHY2 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RFWD2Q8NHY2 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RFWD2Q8NHY2 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RFWD2Q8NHY2 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC15.64■□□□□ 0.1
RFWD2Q8NHY2 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
RFWD2Q8NHY2 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
RFWD2Q8NHY2 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
RFWD2Q8NHY2 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
RFWD2Q8NHY2 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC15.64■□□□□ 0.09
RFWD2Q8NHY2 AL589702.1-201ENST00000641229 1509 ntBASIC15.64■□□□□ 0.09
RFWD2Q8NHY2 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
RFWD2Q8NHY2 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms