Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TMEM53Q6P2H8 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TMEM53Q6P2H8 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
TMEM53Q6P2H8 RNU1-129P-201ENST00000384064 167 ntBASIC14.58□□□□□ -0.08
TMEM53Q6P2H8 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC14.58□□□□□ -0.08
TMEM53Q6P2H8 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC14.58□□□□□ -0.08
TMEM53Q6P2H8 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC14.58□□□□□ -0.08
TMEM53Q6P2H8 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC14.58□□□□□ -0.08
TMEM53Q6P2H8 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC14.58□□□□□ -0.08
TMEM53Q6P2H8 AC074386.1-202ENST00000463561 864 ntBASIC14.58□□□□□ -0.08
TMEM53Q6P2H8 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC14.58□□□□□ -0.08
TMEM53Q6P2H8 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC14.58□□□□□ -0.08
TMEM53Q6P2H8 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
TMEM53Q6P2H8 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC14.58□□□□□ -0.08
TMEM53Q6P2H8 MIR3909-201ENST00000579518 119 ntBASIC14.58□□□□□ -0.08
TMEM53Q6P2H8 U1.21-201ENST00000580816 167 ntBASIC14.58□□□□□ -0.08
TMEM53Q6P2H8 RPS15-207ENST00000591032 550 ntTSL 3 BASIC14.58□□□□□ -0.08
TMEM53Q6P2H8 RPS15-212ENST00000593052 629 ntTSL 2 BASIC14.58□□□□□ -0.08
TMEM53Q6P2H8 AC068137.2-201ENST00000605408 478 ntBASIC14.58□□□□□ -0.08
TMEM53Q6P2H8 CICP23-201ENST00000605013 2741 ntBASIC14.58□□□□□ -0.08
TMEM53Q6P2H8 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TMEM53Q6P2H8 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TMEM53Q6P2H8 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TMEM53Q6P2H8 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC14.58□□□□□ -0.08
TMEM53Q6P2H8 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC14.58□□□□□ -0.08
TMEM53Q6P2H8 ARMCX2-201ENST00000328766 2762 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TMEM53Q6P2H8 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TMEM53Q6P2H8 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC14.58□□□□□ -0.08
TMEM53Q6P2H8 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
TMEM53Q6P2H8 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TMEM53Q6P2H8 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TMEM53Q6P2H8 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
TMEM53Q6P2H8 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TMEM53Q6P2H8 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
TMEM53Q6P2H8 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC14.58□□□□□ -0.08
TMEM53Q6P2H8 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TMEM53Q6P2H8 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
TMEM53Q6P2H8 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.08
TMEM53Q6P2H8 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
TMEM53Q6P2H8 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TMEM53Q6P2H8 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC14.58□□□□□ -0.08
TMEM53Q6P2H8 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
TMEM53Q6P2H8 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TMEM53Q6P2H8 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TMEM53Q6P2H8 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
TMEM53Q6P2H8 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TMEM53Q6P2H8 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
TMEM53Q6P2H8 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TMEM53Q6P2H8 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC14.57□□□□□ -0.08
TMEM53Q6P2H8 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
TMEM53Q6P2H8 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TMEM53Q6P2H8 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TMEM53Q6P2H8 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TMEM53Q6P2H8 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TMEM53Q6P2H8 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TMEM53Q6P2H8 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC14.57□□□□□ -0.08
TMEM53Q6P2H8 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC14.57□□□□□ -0.08
TMEM53Q6P2H8 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC14.57□□□□□ -0.08
TMEM53Q6P2H8 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC14.57□□□□□ -0.08
TMEM53Q6P2H8 POLD2P1-201ENST00000511220 997 ntBASIC14.57□□□□□ -0.08
TMEM53Q6P2H8 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC14.57□□□□□ -0.08
TMEM53Q6P2H8 THTPA-204ENST00000554970 569 ntTSL 4 BASIC14.57□□□□□ -0.08
TMEM53Q6P2H8 THTPA-206ENST00000556015 535 ntTSL 3 BASIC14.57□□□□□ -0.08
TMEM53Q6P2H8 PDPK2P-202ENST00000562415 1191 ntBASIC14.57□□□□□ -0.08
TMEM53Q6P2H8 AC002347.1-201ENST00000569543 541 ntBASIC14.57□□□□□ -0.08
TMEM53Q6P2H8 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC14.57□□□□□ -0.08
TMEM53Q6P2H8 PMS2P7-201ENST00000506558 1336 ntBASIC14.57□□□□□ -0.08
TMEM53Q6P2H8 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
TMEM53Q6P2H8 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
TMEM53Q6P2H8 CD34-203ENST00000367036 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
TMEM53Q6P2H8 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
TMEM53Q6P2H8 PRRT2-201ENST00000300797 3002 ntTSL 2 BASIC14.57□□□□□ -0.08
TMEM53Q6P2H8 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TMEM53Q6P2H8 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TMEM53Q6P2H8 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC14.57□□□□□ -0.08
TMEM53Q6P2H8 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TMEM53Q6P2H8 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC14.56□□□□□ -0.08
TMEM53Q6P2H8 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC14.56□□□□□ -0.08
TMEM53Q6P2H8 CARHSP1-217ENST00000611932 2833 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
TMEM53Q6P2H8 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC14.56□□□□□ -0.08
TMEM53Q6P2H8 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TMEM53Q6P2H8 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TMEM53Q6P2H8 AC232323.1-201ENST00000540724 2099 ntBASIC14.56□□□□□ -0.08
TMEM53Q6P2H8 REXO1L5P-201ENST00000622260 2098 ntBASIC14.56□□□□□ -0.08
TMEM53Q6P2H8 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TMEM53Q6P2H8 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC14.56□□□□□ -0.08
TMEM53Q6P2H8 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
TMEM53Q6P2H8 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
TMEM53Q6P2H8 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
TMEM53Q6P2H8 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TMEM53Q6P2H8 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
TMEM53Q6P2H8 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
TMEM53Q6P2H8 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TMEM53Q6P2H8 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
TMEM53Q6P2H8 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TMEM53Q6P2H8 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TMEM53Q6P2H8 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
TMEM53Q6P2H8 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
TMEM53Q6P2H8 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
TMEM53Q6P2H8 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 73.6 ms