Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 RN7SL720P-201ENST00000488178 304 ntBASIC23.26■■□□□ 1.31
CDC42BPAQ5VT25 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
CDC42BPAQ5VT25 AC116345.2-201ENST00000512837 523 ntBASIC23.26■■□□□ 1.31
CDC42BPAQ5VT25 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC23.26■■□□□ 1.31
CDC42BPAQ5VT25 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC23.26■■□□□ 1.31
CDC42BPAQ5VT25 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
CDC42BPAQ5VT25 BNIP3P13-201ENST00000599968 566 ntBASIC23.26■■□□□ 1.31
CDC42BPAQ5VT25 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC23.26■■□□□ 1.31
CDC42BPAQ5VT25 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CDC42BPAQ5VT25 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC23.26■■□□□ 1.31
CDC42BPAQ5VT25 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC23.26■■□□□ 1.31
CDC42BPAQ5VT25 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC23.26■■□□□ 1.31
CDC42BPAQ5VT25 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC23.26■■□□□ 1.31
CDC42BPAQ5VT25 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
CDC42BPAQ5VT25 TUBBP5-203ENST00000508529 1334 ntBASIC23.26■■□□□ 1.31
CDC42BPAQ5VT25 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CDC42BPAQ5VT25 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC23.26■■□□□ 1.31
CDC42BPAQ5VT25 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC23.26■■□□□ 1.31
CDC42BPAQ5VT25 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CDC42BPAQ5VT25 NKILA-202ENST00000614771 2598 ntBASIC23.25■■□□□ 1.31
CDC42BPAQ5VT25 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
CDC42BPAQ5VT25 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CDC42BPAQ5VT25 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
CDC42BPAQ5VT25 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC23.25■■□□□ 1.31
CDC42BPAQ5VT25 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC23.25■■□□□ 1.31
CDC42BPAQ5VT25 PARVG-202ENST00000415224 999 ntTSL 2 BASIC23.25■■□□□ 1.31
CDC42BPAQ5VT25 PDIA3P2-201ENST00000428073 158 ntBASIC23.25■■□□□ 1.31
CDC42BPAQ5VT25 AC103988.2-201ENST00000561804 725 ntBASIC23.25■■□□□ 1.31
CDC42BPAQ5VT25 SPCS2P2-201ENST00000603270 608 ntBASIC23.25■■□□□ 1.31
CDC42BPAQ5VT25 AC018635.2-201ENST00000608625 364 ntBASIC23.25■■□□□ 1.31
CDC42BPAQ5VT25 AP000346.4-201ENST00000614827 381 ntBASIC23.25■■□□□ 1.31
CDC42BPAQ5VT25 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
CDC42BPAQ5VT25 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC23.25■■□□□ 1.31
CDC42BPAQ5VT25 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CDC42BPAQ5VT25 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
CDC42BPAQ5VT25 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CDC42BPAQ5VT25 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC23.25■■□□□ 1.31
CDC42BPAQ5VT25 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC23.25■■□□□ 1.31
CDC42BPAQ5VT25 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC23.25■■□□□ 1.31
CDC42BPAQ5VT25 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CDC42BPAQ5VT25 RNMTL1P1-201ENST00000454103 560 ntBASIC23.25■■□□□ 1.31
CDC42BPAQ5VT25 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC23.25■■□□□ 1.31
CDC42BPAQ5VT25 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC23.25■■□□□ 1.31
CDC42BPAQ5VT25 CFL1-214ENST00000534769 758 ntTSL 2 BASIC23.25■■□□□ 1.31
CDC42BPAQ5VT25 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CDC42BPAQ5VT25 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
CDC42BPAQ5VT25 AC079336.7-201ENST00000623428 1078 ntBASIC23.25■■□□□ 1.31
CDC42BPAQ5VT25 AC068587.8-201ENST00000641239 219 ntBASIC23.25■■□□□ 1.31
CDC42BPAQ5VT25 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
CDC42BPAQ5VT25 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CDC42BPAQ5VT25 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC23.24■■□□□ 1.31
CDC42BPAQ5VT25 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CDC42BPAQ5VT25 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CDC42BPAQ5VT25 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CDC42BPAQ5VT25 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CDC42BPAQ5VT25 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC23.24■■□□□ 1.31
CDC42BPAQ5VT25 DPM3-202ENST00000368399 517 ntBASIC23.24■■□□□ 1.31
CDC42BPAQ5VT25 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CDC42BPAQ5VT25 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC23.24■■□□□ 1.31
CDC42BPAQ5VT25 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC23.24■■□□□ 1.31
CDC42BPAQ5VT25 PARP8-206ENST00000503665 572 ntTSL 4 BASIC23.24■■□□□ 1.31
CDC42BPAQ5VT25 AC106794.1-201ENST00000506935 792 ntBASIC23.24■■□□□ 1.31
CDC42BPAQ5VT25 AC022616.1-201ENST00000518688 554 ntBASIC23.24■■□□□ 1.31
CDC42BPAQ5VT25 RN7SL774P-201ENST00000577467 290 ntBASIC23.24■■□□□ 1.31
CDC42BPAQ5VT25 MIR4722-201ENST00000578292 60 ntBASIC23.24■■□□□ 1.31
CDC42BPAQ5VT25 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC23.24■■□□□ 1.31
CDC42BPAQ5VT25 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CDC42BPAQ5VT25 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.31
CDC42BPAQ5VT25 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC23.24■■□□□ 1.31
CDC42BPAQ5VT25 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC23.24■■□□□ 1.31
CDC42BPAQ5VT25 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC23.24■■□□□ 1.31
CDC42BPAQ5VT25 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC23.24■■□□□ 1.31
CDC42BPAQ5VT25 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CDC42BPAQ5VT25 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CDC42BPAQ5VT25 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
CDC42BPAQ5VT25 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC23.23■■□□□ 1.31
CDC42BPAQ5VT25 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
CDC42BPAQ5VT25 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
CDC42BPAQ5VT25 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC23.23■■□□□ 1.31
CDC42BPAQ5VT25 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC23.23■■□□□ 1.31
CDC42BPAQ5VT25 OARD1-204ENST00000464633 717 ntTSL 2 BASIC23.23■■□□□ 1.31
CDC42BPAQ5VT25 AC024681.1-201ENST00000521917 487 ntBASIC23.23■■□□□ 1.31
CDC42BPAQ5VT25 AC134698.3-201ENST00000523880 214 ntBASIC23.23■■□□□ 1.31
CDC42BPAQ5VT25 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC23.23■■□□□ 1.31
CDC42BPAQ5VT25 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CDC42BPAQ5VT25 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
CDC42BPAQ5VT25 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CDC42BPAQ5VT25 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
CDC42BPAQ5VT25 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC23.23■■□□□ 1.31
CDC42BPAQ5VT25 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC23.23■■□□□ 1.31
CDC42BPAQ5VT25 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
CDC42BPAQ5VT25 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC23.23■■□□□ 1.31
CDC42BPAQ5VT25 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC23.23■■□□□ 1.31
CDC42BPAQ5VT25 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC23.23■■□□□ 1.31
CDC42BPAQ5VT25 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC23.23■■□□□ 1.31
CDC42BPAQ5VT25 AC099398.1-201ENST00000567919 2776 ntBASIC23.23■■□□□ 1.31
CDC42BPAQ5VT25 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CDC42BPAQ5VT25 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC23.22■■□□□ 1.31
CDC42BPAQ5VT25 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
CDC42BPAQ5VT25 MST1L-201ENST00000442552 2185 ntBASIC23.22■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms