Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC14.14□□□□□ -0.15
RNFT1Q5M7Z0 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RNFT1Q5M7Z0 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC14.14□□□□□ -0.15
RNFT1Q5M7Z0 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RNFT1Q5M7Z0 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
RNFT1Q5M7Z0 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC14.14□□□□□ -0.15
RNFT1Q5M7Z0 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
RNFT1Q5M7Z0 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC14.14□□□□□ -0.15
RNFT1Q5M7Z0 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
RNFT1Q5M7Z0 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RNFT1Q5M7Z0 AC134312.5-201ENST00000568031 1313 ntBASIC14.14□□□□□ -0.15
RNFT1Q5M7Z0 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC14.14□□□□□ -0.15
RNFT1Q5M7Z0 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
RNFT1Q5M7Z0 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
RNFT1Q5M7Z0 LINC02199-201ENST00000506655 2702 ntBASIC14.14□□□□□ -0.15
RNFT1Q5M7Z0 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
RNFT1Q5M7Z0 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RNFT1Q5M7Z0 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
RNFT1Q5M7Z0 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC14.13□□□□□ -0.15
RNFT1Q5M7Z0 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
RNFT1Q5M7Z0 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RNFT1Q5M7Z0 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RNFT1Q5M7Z0 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RNFT1Q5M7Z0 AC006449.5-201ENST00000610658 2098 ntBASIC14.13□□□□□ -0.15
RNFT1Q5M7Z0 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RNFT1Q5M7Z0 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
RNFT1Q5M7Z0 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
RNFT1Q5M7Z0 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
RNFT1Q5M7Z0 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
RNFT1Q5M7Z0 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RNFT1Q5M7Z0 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC14.13□□□□□ -0.15
RNFT1Q5M7Z0 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
RNFT1Q5M7Z0 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC14.13□□□□□ -0.15
RNFT1Q5M7Z0 AL133267.1-201ENST00000398220 340 ntBASIC14.13□□□□□ -0.15
RNFT1Q5M7Z0 AC099336.1-201ENST00000417053 1171 ntBASIC14.13□□□□□ -0.15
RNFT1Q5M7Z0 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
RNFT1Q5M7Z0 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC14.13□□□□□ -0.15
RNFT1Q5M7Z0 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
RNFT1Q5M7Z0 AC012441.1-201ENST00000446669 685 ntBASIC14.13□□□□□ -0.15
RNFT1Q5M7Z0 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
RNFT1Q5M7Z0 AC106760.1-201ENST00000508690 800 ntBASIC14.13□□□□□ -0.15
RNFT1Q5M7Z0 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC14.13□□□□□ -0.15
RNFT1Q5M7Z0 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
RNFT1Q5M7Z0 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC14.13□□□□□ -0.15
RNFT1Q5M7Z0 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
RNFT1Q5M7Z0 AP001063.1-201ENST00000568332 529 ntBASIC14.13□□□□□ -0.15
RNFT1Q5M7Z0 AC009486.1-201ENST00000569860 813 ntBASIC14.13□□□□□ -0.15
RNFT1Q5M7Z0 AC015910.1-201ENST00000579400 975 ntBASIC14.13□□□□□ -0.15
RNFT1Q5M7Z0 AC107373.2-201ENST00000607735 490 ntBASIC14.13□□□□□ -0.15
RNFT1Q5M7Z0 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC14.13□□□□□ -0.15
RNFT1Q5M7Z0 METTL26-214ENST00000614890 801 ntTSL 3 BASIC14.13□□□□□ -0.15
RNFT1Q5M7Z0 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
RNFT1Q5M7Z0 PFAS-212ENST00000625942 396 ntTSL 5 BASIC14.13□□□□□ -0.15
RNFT1Q5M7Z0 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC14.13□□□□□ -0.15
RNFT1Q5M7Z0 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
RNFT1Q5M7Z0 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC14.13□□□□□ -0.15
RNFT1Q5M7Z0 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
RNFT1Q5M7Z0 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RNFT1Q5M7Z0 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RNFT1Q5M7Z0 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
RNFT1Q5M7Z0 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC14.13□□□□□ -0.15
RNFT1Q5M7Z0 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
RNFT1Q5M7Z0 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RNFT1Q5M7Z0 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RNFT1Q5M7Z0 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC14.13□□□□□ -0.15
RNFT1Q5M7Z0 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
RNFT1Q5M7Z0 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC14.12□□□□□ -0.15
RNFT1Q5M7Z0 AGER-206ENST00000375070 1463 ntTSL 5 BASIC14.12□□□□□ -0.15
RNFT1Q5M7Z0 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
RNFT1Q5M7Z0 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
RNFT1Q5M7Z0 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
RNFT1Q5M7Z0 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
RNFT1Q5M7Z0 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RNFT1Q5M7Z0 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RNFT1Q5M7Z0 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RNFT1Q5M7Z0 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
RNFT1Q5M7Z0 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
RNFT1Q5M7Z0 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
RNFT1Q5M7Z0 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
RNFT1Q5M7Z0 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RNFT1Q5M7Z0 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RNFT1Q5M7Z0 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RNFT1Q5M7Z0 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
RNFT1Q5M7Z0 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
RNFT1Q5M7Z0 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC14.12□□□□□ -0.15
RNFT1Q5M7Z0 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
RNFT1Q5M7Z0 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC14.12□□□□□ -0.15
RNFT1Q5M7Z0 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
RNFT1Q5M7Z0 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC14.12□□□□□ -0.15
RNFT1Q5M7Z0 AC092658.1-201ENST00000505836 891 ntBASIC14.12□□□□□ -0.15
RNFT1Q5M7Z0 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC14.12□□□□□ -0.15
RNFT1Q5M7Z0 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC14.12□□□□□ -0.15
RNFT1Q5M7Z0 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
RNFT1Q5M7Z0 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RNFT1Q5M7Z0 ATF5-205ENST00000600336 682 ntTSL 2 BASIC14.12□□□□□ -0.15
RNFT1Q5M7Z0 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC14.12□□□□□ -0.15
RNFT1Q5M7Z0 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
RNFT1Q5M7Z0 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC14.12□□□□□ -0.15
RNFT1Q5M7Z0 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
RNFT1Q5M7Z0 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC14.12□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 3272.2 ms