Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
PDS5AQ29RF7 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
PDS5AQ29RF7 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PDS5AQ29RF7 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PDS5AQ29RF7 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
PDS5AQ29RF7 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
PDS5AQ29RF7 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PDS5AQ29RF7 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PDS5AQ29RF7 RNU1-114P-201ENST00000365297 166 ntBASIC18.7■□□□□ 0.58
PDS5AQ29RF7 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PDS5AQ29RF7 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PDS5AQ29RF7 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC18.7■□□□□ 0.58
PDS5AQ29RF7 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC18.7■□□□□ 0.58
PDS5AQ29RF7 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC18.7■□□□□ 0.58
PDS5AQ29RF7 AC114812.1-204ENST00000449669 728 ntBASIC18.7■□□□□ 0.58
PDS5AQ29RF7 RNA5SP412-201ENST00000516234 123 ntBASIC18.7■□□□□ 0.58
PDS5AQ29RF7 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC18.7■□□□□ 0.58
PDS5AQ29RF7 AC079316.1-201ENST00000548397 411 ntBASIC18.7■□□□□ 0.58
PDS5AQ29RF7 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC18.7■□□□□ 0.58
PDS5AQ29RF7 AL033527.4-201ENST00000641026 673 ntBASIC18.7■□□□□ 0.58
PDS5AQ29RF7 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PDS5AQ29RF7 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PDS5AQ29RF7 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PDS5AQ29RF7 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC18.7■□□□□ 0.58
PDS5AQ29RF7 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PDS5AQ29RF7 KRT8P35-201ENST00000483942 1338 ntBASIC18.7■□□□□ 0.58
PDS5AQ29RF7 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
PDS5AQ29RF7 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PDS5AQ29RF7 AP005117.1-202ENST00000581724 1908 ntBASIC18.69■□□□□ 0.58
PDS5AQ29RF7 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PDS5AQ29RF7 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PDS5AQ29RF7 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PDS5AQ29RF7 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PDS5AQ29RF7 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC18.69■□□□□ 0.58
PDS5AQ29RF7 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC18.69■□□□□ 0.58
PDS5AQ29RF7 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
PDS5AQ29RF7 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PDS5AQ29RF7 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
PDS5AQ29RF7 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PDS5AQ29RF7 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
PDS5AQ29RF7 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PDS5AQ29RF7 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PDS5AQ29RF7 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PDS5AQ29RF7 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
PDS5AQ29RF7 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PDS5AQ29RF7 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
PDS5AQ29RF7 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC18.69■□□□□ 0.58
PDS5AQ29RF7 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC18.69■□□□□ 0.58
PDS5AQ29RF7 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC18.69■□□□□ 0.58
PDS5AQ29RF7 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC18.69■□□□□ 0.58
PDS5AQ29RF7 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC18.69■□□□□ 0.58
PDS5AQ29RF7 AC244669.2-201ENST00000612320 853 ntBASIC18.69■□□□□ 0.58
PDS5AQ29RF7 LARP4-220ENST00000615080 856 ntTSL 5 BASIC18.69■□□□□ 0.58
PDS5AQ29RF7 RHOXF1P1-202ENST00000635473 501 ntBASIC18.69■□□□□ 0.58
PDS5AQ29RF7 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
PDS5AQ29RF7 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
PDS5AQ29RF7 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PDS5AQ29RF7 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PDS5AQ29RF7 AMT-224ENST00000635808 1610 ntTSL 5 BASIC18.69■□□□□ 0.58
PDS5AQ29RF7 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PDS5AQ29RF7 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PDS5AQ29RF7 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PDS5AQ29RF7 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PDS5AQ29RF7 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PDS5AQ29RF7 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC18.68■□□□□ 0.58
PDS5AQ29RF7 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PDS5AQ29RF7 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PDS5AQ29RF7 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
PDS5AQ29RF7 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC18.68■□□□□ 0.58
PDS5AQ29RF7 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC18.68■□□□□ 0.58
PDS5AQ29RF7 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
PDS5AQ29RF7 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PDS5AQ29RF7 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PDS5AQ29RF7 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PDS5AQ29RF7 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC18.68■□□□□ 0.58
PDS5AQ29RF7 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PDS5AQ29RF7 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PDS5AQ29RF7 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PDS5AQ29RF7 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
PDS5AQ29RF7 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PDS5AQ29RF7 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
PDS5AQ29RF7 KLF2P2-201ENST00000416807 1039 ntBASIC18.68■□□□□ 0.58
PDS5AQ29RF7 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
PDS5AQ29RF7 CSF2RBP1-201ENST00000447905 391 ntBASIC18.68■□□□□ 0.58
PDS5AQ29RF7 BNIP3P42-201ENST00000454982 569 ntBASIC18.68■□□□□ 0.58
PDS5AQ29RF7 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC18.68■□□□□ 0.58
PDS5AQ29RF7 AC004066.1-201ENST00000502488 802 ntBASIC18.68■□□□□ 0.58
PDS5AQ29RF7 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC18.68■□□□□ 0.58
PDS5AQ29RF7 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC18.68■□□□□ 0.58
PDS5AQ29RF7 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC18.68■□□□□ 0.58
PDS5AQ29RF7 BNIP3P29-201ENST00000598302 571 ntBASIC18.68■□□□□ 0.58
PDS5AQ29RF7 AC011447.5-201ENST00000616168 564 ntBASIC18.68■□□□□ 0.58
PDS5AQ29RF7 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC18.68■□□□□ 0.58
PDS5AQ29RF7 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PDS5AQ29RF7 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PDS5AQ29RF7 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PDS5AQ29RF7 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PDS5AQ29RF7 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PDS5AQ29RF7 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC18.68■□□□□ 0.58
PDS5AQ29RF7 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms