Protein–RNA interactions for Protein: Q07654

TFF3, Trefoil factor 3, humanhuman

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3Q07654 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC13.84□□□□□ -0.19
TFF3Q07654 AC108725.1-201ENST00000495472 409 ntBASIC13.84□□□□□ -0.19
TFF3Q07654 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TFF3Q07654 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
TFF3Q07654 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC13.84□□□□□ -0.19
TFF3Q07654 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC13.84□□□□□ -0.19
TFF3Q07654 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TFF3Q07654 AC120045.2-201ENST00000567334 178 ntBASIC13.84□□□□□ -0.19
TFF3Q07654 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC13.84□□□□□ -0.19
TFF3Q07654 AL049840.4-201ENST00000602422 811 ntBASIC13.84□□□□□ -0.19
TFF3Q07654 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC13.84□□□□□ -0.19
TFF3Q07654 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TFF3Q07654 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TFF3Q07654 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TFF3Q07654 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
TFF3Q07654 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TFF3Q07654 PGR-209ENST00000617858 2816 ntTSL 5 BASIC13.84□□□□□ -0.19
TFF3Q07654 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TFF3Q07654 ZBTB45P2-201ENST00000452245 1531 ntBASIC13.84□□□□□ -0.19
TFF3Q07654 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
TFF3Q07654 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.19
TFF3Q07654 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.19
TFF3Q07654 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
TFF3Q07654 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC13.83□□□□□ -0.19
TFF3Q07654 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC13.83□□□□□ -0.19
TFF3Q07654 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC13.83□□□□□ -0.19
TFF3Q07654 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC13.83□□□□□ -0.19
TFF3Q07654 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC13.83□□□□□ -0.19
TFF3Q07654 FRMD6-AS1-201ENST00000617151 2229 ntBASIC13.83□□□□□ -0.2
TFF3Q07654 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TFF3Q07654 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
TFF3Q07654 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TFF3Q07654 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TFF3Q07654 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TFF3Q07654 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TFF3Q07654 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TFF3Q07654 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC13.83□□□□□ -0.2
TFF3Q07654 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
TFF3Q07654 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TFF3Q07654 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC13.83□□□□□ -0.2
TFF3Q07654 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.2
TFF3Q07654 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TFF3Q07654 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC13.83□□□□□ -0.2
TFF3Q07654 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TFF3Q07654 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
TFF3Q07654 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TFF3Q07654 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TFF3Q07654 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TFF3Q07654 C1QBPP1-201ENST00000400117 770 ntBASIC13.83□□□□□ -0.2
TFF3Q07654 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
TFF3Q07654 BAATP1-201ENST00000412284 1225 ntBASIC13.83□□□□□ -0.2
TFF3Q07654 BCYRN1-201ENST00000418539 200 ntBASIC13.83□□□□□ -0.2
TFF3Q07654 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC13.83□□□□□ -0.2
TFF3Q07654 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC13.83□□□□□ -0.2
TFF3Q07654 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC13.83□□□□□ -0.2
TFF3Q07654 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC13.83□□□□□ -0.2
TFF3Q07654 FTH1P14-201ENST00000482930 551 ntBASIC13.83□□□□□ -0.2
TFF3Q07654 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC13.83□□□□□ -0.2
TFF3Q07654 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC13.83□□□□□ -0.2
TFF3Q07654 SLED1-202ENST00000512051 380 ntBASIC13.83□□□□□ -0.2
TFF3Q07654 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC13.83□□□□□ -0.2
TFF3Q07654 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC13.83□□□□□ -0.2
TFF3Q07654 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC13.83□□□□□ -0.2
TFF3Q07654 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC13.83□□□□□ -0.2
TFF3Q07654 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC13.83□□□□□ -0.2
TFF3Q07654 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC13.83□□□□□ -0.2
TFF3Q07654 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TFF3Q07654 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC13.83□□□□□ -0.2
TFF3Q07654 AC009486.1-201ENST00000569860 813 ntBASIC13.83□□□□□ -0.2
TFF3Q07654 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TFF3Q07654 AC244093.1-201ENST00000610837 814 ntBASIC13.83□□□□□ -0.2
TFF3Q07654 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TFF3Q07654 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
TFF3Q07654 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC13.83□□□□□ -0.2
TFF3Q07654 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TFF3Q07654 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TFF3Q07654 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TFF3Q07654 MSTO2P-201ENST00000314835 1709 ntBASIC13.83□□□□□ -0.2
TFF3Q07654 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TFF3Q07654 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC13.83□□□□□ -0.2
TFF3Q07654 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC13.83□□□□□ -0.2
TFF3Q07654 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC13.83□□□□□ -0.2
TFF3Q07654 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC13.83□□□□□ -0.2
TFF3Q07654 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
TFF3Q07654 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC13.83□□□□□ -0.2
TFF3Q07654 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
TFF3Q07654 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TFF3Q07654 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TFF3Q07654 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC13.83□□□□□ -0.2
TFF3Q07654 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TFF3Q07654 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TFF3Q07654 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
TFF3Q07654 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
TFF3Q07654 AC132872.4-202ENST00000622924 2756 ntBASIC13.83□□□□□ -0.2
TFF3Q07654 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
TFF3Q07654 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC13.82□□□□□ -0.2
TFF3Q07654 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
TFF3Q07654 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TFF3Q07654 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
TFF3Q07654 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms