Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC14.51□□□□□ -0.09
CLDN20P56880 AC026748.1-201ENST00000624349 3251 ntBASIC14.51□□□□□ -0.09
CLDN20P56880 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC14.51□□□□□ -0.09
CLDN20P56880 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CLDN20P56880 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
CLDN20P56880 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CLDN20P56880 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
CLDN20P56880 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CLDN20P56880 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CLDN20P56880 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CLDN20P56880 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC14.51□□□□□ -0.09
CLDN20P56880 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CLDN20P56880 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CLDN20P56880 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CLDN20P56880 POLL-217ENST00000628479 1953 ntTSL 5 BASIC14.51□□□□□ -0.09
CLDN20P56880 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CLDN20P56880 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
CLDN20P56880 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
CLDN20P56880 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CLDN20P56880 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC14.5□□□□□ -0.09
CLDN20P56880 AC104581.4-201ENST00000623126 3052 ntBASIC14.5□□□□□ -0.09
CLDN20P56880 AC100757.3-201ENST00000622361 1406 ntBASIC14.5□□□□□ -0.09
CLDN20P56880 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
CLDN20P56880 SP100-205ENST00000409824 1802 ntTSL 5 BASIC14.5□□□□□ -0.09
CLDN20P56880 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CLDN20P56880 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
CLDN20P56880 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC14.5□□□□□ -0.09
CLDN20P56880 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CLDN20P56880 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CLDN20P56880 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CLDN20P56880 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CLDN20P56880 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CLDN20P56880 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CLDN20P56880 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CLDN20P56880 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC14.5□□□□□ -0.09
CLDN20P56880 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CLDN20P56880 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CLDN20P56880 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CLDN20P56880 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC14.5□□□□□ -0.09
CLDN20P56880 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
CLDN20P56880 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CLDN20P56880 BASP1P1-201ENST00000430708 665 ntBASIC14.5□□□□□ -0.09
CLDN20P56880 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC14.5□□□□□ -0.09
CLDN20P56880 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC14.5□□□□□ -0.09
CLDN20P56880 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC14.5□□□□□ -0.09
CLDN20P56880 AQP6-203ENST00000551733 849 ntTSL 3 BASIC14.5□□□□□ -0.09
CLDN20P56880 INO80C-206ENST00000586489 594 ntTSL 3 BASIC14.5□□□□□ -0.09
CLDN20P56880 AC011467.4-201ENST00000594891 528 ntBASIC14.5□□□□□ -0.09
CLDN20P56880 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC14.5□□□□□ -0.09
CLDN20P56880 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC14.5□□□□□ -0.09
CLDN20P56880 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
CLDN20P56880 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC14.5□□□□□ -0.09
CLDN20P56880 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC14.5□□□□□ -0.09
CLDN20P56880 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CLDN20P56880 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CLDN20P56880 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CLDN20P56880 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CLDN20P56880 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
CLDN20P56880 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC14.5□□□□□ -0.09
CLDN20P56880 CICP4-201ENST00000447359 2812 ntBASIC14.5□□□□□ -0.09
CLDN20P56880 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CLDN20P56880 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC14.5□□□□□ -0.09
CLDN20P56880 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CLDN20P56880 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CLDN20P56880 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CLDN20P56880 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
CLDN20P56880 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC14.5□□□□□ -0.09
CLDN20P56880 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CLDN20P56880 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CLDN20P56880 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC14.49□□□□□ -0.09
CLDN20P56880 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
CLDN20P56880 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
CLDN20P56880 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CLDN20P56880 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
CLDN20P56880 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CLDN20P56880 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CLDN20P56880 WARS-232ENST00000556645 2508 ntTSL 5 BASIC14.49□□□□□ -0.09
CLDN20P56880 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC14.49□□□□□ -0.09
CLDN20P56880 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC14.49□□□□□ -0.09
CLDN20P56880 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC14.49□□□□□ -0.09
CLDN20P56880 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
CLDN20P56880 NORAD-201ENST00000565493 5339 ntBASIC14.49□□□□□ -0.09
CLDN20P56880 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CLDN20P56880 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
CLDN20P56880 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CLDN20P56880 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CLDN20P56880 CYP4F24P-201ENST00000586049 1580 ntBASIC14.49□□□□□ -0.09
CLDN20P56880 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CLDN20P56880 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
CLDN20P56880 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
CLDN20P56880 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC14.49□□□□□ -0.09
CLDN20P56880 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CLDN20P56880 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CLDN20P56880 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC14.49□□□□□ -0.09
CLDN20P56880 LCK-206ENST00000373564 2137 ntTSL 5 BASIC14.49□□□□□ -0.09
CLDN20P56880 R3HDM2P2-201ENST00000401880 2116 ntBASIC14.49□□□□□ -0.09
CLDN20P56880 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC14.49□□□□□ -0.09
CLDN20P56880 AL080243.2-201ENST00000418783 582 ntBASIC14.49□□□□□ -0.09
CLDN20P56880 AC241585.1-201ENST00000433527 519 ntBASIC14.49□□□□□ -0.09
CLDN20P56880 AC245100.5-201ENST00000452108 331 ntBASIC14.49□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms