Protein–RNA interactions for Protein: P54709

ATP1B3, Sodium/potassium-transporting ATPase subunit beta-3, humanhuman

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1B3P54709 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
ATP1B3P54709 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
ATP1B3P54709 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
ATP1B3P54709 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
ATP1B3P54709 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
ATP1B3P54709 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
ATP1B3P54709 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC13.76□□□□□ -0.21
ATP1B3P54709 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC13.76□□□□□ -0.21
ATP1B3P54709 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
ATP1B3P54709 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
ATP1B3P54709 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
ATP1B3P54709 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
ATP1B3P54709 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
ATP1B3P54709 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
ATP1B3P54709 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
ATP1B3P54709 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
ATP1B3P54709 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
ATP1B3P54709 CBR1-202ENST00000399191 838 ntTSL 3 BASIC13.76□□□□□ -0.21
ATP1B3P54709 PP14571-201ENST00000404327 934 ntTSL 2 BASIC13.76□□□□□ -0.21
ATP1B3P54709 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
ATP1B3P54709 TFAMP1-201ENST00000412727 736 ntBASIC13.76□□□□□ -0.21
ATP1B3P54709 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
ATP1B3P54709 FDX1P1-201ENST00000449115 551 ntBASIC13.76□□□□□ -0.21
ATP1B3P54709 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC13.76□□□□□ -0.21
ATP1B3P54709 EHF-205ENST00000527935 557 ntTSL 2 BASIC13.76□□□□□ -0.21
ATP1B3P54709 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC13.76□□□□□ -0.21
ATP1B3P54709 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
ATP1B3P54709 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC13.76□□□□□ -0.21
ATP1B3P54709 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC13.76□□□□□ -0.21
ATP1B3P54709 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC13.76□□□□□ -0.21
ATP1B3P54709 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC13.76□□□□□ -0.21
ATP1B3P54709 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC13.76□□□□□ -0.21
ATP1B3P54709 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
ATP1B3P54709 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
ATP1B3P54709 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC13.76□□□□□ -0.21
ATP1B3P54709 AL359258.3-201ENST00000622910 2331 ntBASIC13.76□□□□□ -0.21
ATP1B3P54709 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
ATP1B3P54709 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC13.76□□□□□ -0.21
ATP1B3P54709 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
ATP1B3P54709 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC13.76□□□□□ -0.21
ATP1B3P54709 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
ATP1B3P54709 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
ATP1B3P54709 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
ATP1B3P54709 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
ATP1B3P54709 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
ATP1B3P54709 AC020658.6-201ENST00000623564 1870 ntBASIC13.76□□□□□ -0.21
ATP1B3P54709 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
ATP1B3P54709 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
ATP1B3P54709 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC13.76□□□□□ -0.21
ATP1B3P54709 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
ATP1B3P54709 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
ATP1B3P54709 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
ATP1B3P54709 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
ATP1B3P54709 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
ATP1B3P54709 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
ATP1B3P54709 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
ATP1B3P54709 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
ATP1B3P54709 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
ATP1B3P54709 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
ATP1B3P54709 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
ATP1B3P54709 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC13.75□□□□□ -0.21
ATP1B3P54709 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
ATP1B3P54709 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
ATP1B3P54709 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
ATP1B3P54709 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
ATP1B3P54709 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
ATP1B3P54709 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC13.75□□□□□ -0.21
ATP1B3P54709 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC13.75□□□□□ -0.21
ATP1B3P54709 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
ATP1B3P54709 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
ATP1B3P54709 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
ATP1B3P54709 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
ATP1B3P54709 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC13.75□□□□□ -0.21
ATP1B3P54709 RN7SL589P-201ENST00000481268 310 ntBASIC13.75□□□□□ -0.21
ATP1B3P54709 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC13.75□□□□□ -0.21
ATP1B3P54709 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
ATP1B3P54709 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC13.75□□□□□ -0.21
ATP1B3P54709 AL135744.1-201ENST00000565098 629 ntBASIC13.75□□□□□ -0.21
ATP1B3P54709 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC13.75□□□□□ -0.21
ATP1B3P54709 NKG7-205ENST00000600427 520 ntTSL 3 BASIC13.75□□□□□ -0.21
ATP1B3P54709 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC13.75□□□□□ -0.21
ATP1B3P54709 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC13.75□□□□□ -0.21
ATP1B3P54709 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
ATP1B3P54709 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
ATP1B3P54709 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC13.75□□□□□ -0.21
ATP1B3P54709 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
ATP1B3P54709 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
ATP1B3P54709 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
ATP1B3P54709 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC13.75□□□□□ -0.21
ATP1B3P54709 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
ATP1B3P54709 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
ATP1B3P54709 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC13.75□□□□□ -0.21
ATP1B3P54709 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC13.75□□□□□ -0.21
ATP1B3P54709 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
ATP1B3P54709 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
ATP1B3P54709 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
ATP1B3P54709 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
ATP1B3P54709 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
ATP1B3P54709 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
ATP1B3P54709 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 95.1 ms