Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
HCFC1P51610 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
HCFC1P51610 BANP-204ENST00000393208 2283 ntTSL 2 BASIC13.64□□□□□ -0.23
HCFC1P51610 AC026691.1-201ENST00000602502 2017 ntBASIC13.64□□□□□ -0.23
HCFC1P51610 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC13.64□□□□□ -0.23
HCFC1P51610 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
HCFC1P51610 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
HCFC1P51610 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC13.64□□□□□ -0.23
HCFC1P51610 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
HCFC1P51610 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC13.64□□□□□ -0.23
HCFC1P51610 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC13.64□□□□□ -0.23
HCFC1P51610 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
HCFC1P51610 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
HCFC1P51610 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC13.64□□□□□ -0.23
HCFC1P51610 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HCFC1P51610 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HCFC1P51610 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
HCFC1P51610 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HCFC1P51610 FRMD6-AS1-201ENST00000617151 2229 ntBASIC13.64□□□□□ -0.23
HCFC1P51610 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
HCFC1P51610 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
HCFC1P51610 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
HCFC1P51610 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
HCFC1P51610 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC13.64□□□□□ -0.23
HCFC1P51610 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
HCFC1P51610 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC13.64□□□□□ -0.23
HCFC1P51610 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC13.64□□□□□ -0.23
HCFC1P51610 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
HCFC1P51610 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HCFC1P51610 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HCFC1P51610 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
HCFC1P51610 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
HCFC1P51610 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HCFC1P51610 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC13.63□□□□□ -0.23
HCFC1P51610 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC13.63□□□□□ -0.23
HCFC1P51610 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
HCFC1P51610 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC13.63□□□□□ -0.23
HCFC1P51610 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
HCFC1P51610 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC13.63□□□□□ -0.23
HCFC1P51610 AL139384.1-201ENST00000612143 3047 ntBASIC13.63□□□□□ -0.23
HCFC1P51610 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC13.63□□□□□ -0.23
HCFC1P51610 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
HCFC1P51610 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
HCFC1P51610 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
HCFC1P51610 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC13.63□□□□□ -0.23
HCFC1P51610 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
HCFC1P51610 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
HCFC1P51610 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
HCFC1P51610 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
HCFC1P51610 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC13.63□□□□□ -0.23
HCFC1P51610 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
HCFC1P51610 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
HCFC1P51610 AL590640.2-201ENST00000457038 527 ntBASIC13.63□□□□□ -0.23
HCFC1P51610 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC13.63□□□□□ -0.23
HCFC1P51610 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC13.63□□□□□ -0.23
HCFC1P51610 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC13.63□□□□□ -0.23
HCFC1P51610 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
HCFC1P51610 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
HCFC1P51610 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC13.63□□□□□ -0.23
HCFC1P51610 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
HCFC1P51610 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
HCFC1P51610 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC13.63□□□□□ -0.23
HCFC1P51610 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC13.63□□□□□ -0.23
HCFC1P51610 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
HCFC1P51610 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
HCFC1P51610 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
HCFC1P51610 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
HCFC1P51610 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
HCFC1P51610 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
HCFC1P51610 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC13.63□□□□□ -0.23
HCFC1P51610 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC13.63□□□□□ -0.23
HCFC1P51610 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
HCFC1P51610 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
HCFC1P51610 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
HCFC1P51610 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
HCFC1P51610 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC13.63□□□□□ -0.23
HCFC1P51610 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
HCFC1P51610 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
HCFC1P51610 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC13.63□□□□□ -0.23
HCFC1P51610 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
HCFC1P51610 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC13.63□□□□□ -0.23
HCFC1P51610 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
HCFC1P51610 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
HCFC1P51610 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
HCFC1P51610 BTBD6P1-201ENST00000412176 1267 ntBASIC13.63□□□□□ -0.23
HCFC1P51610 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC13.63□□□□□ -0.23
HCFC1P51610 AC091804.1-201ENST00000486888 567 ntBASIC13.63□□□□□ -0.23
HCFC1P51610 PARP8-218ENST00000513738 596 ntTSL 4 BASIC13.63□□□□□ -0.23
HCFC1P51610 AP001582.1-201ENST00000525856 295 ntBASIC13.63□□□□□ -0.23
HCFC1P51610 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC13.63□□□□□ -0.23
HCFC1P51610 AL021578.1-201ENST00000613646 709 ntBASIC13.63□□□□□ -0.23
HCFC1P51610 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
HCFC1P51610 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC13.63□□□□□ -0.23
HCFC1P51610 AC008687.7-202ENST00000637404 953 ntBASIC13.63□□□□□ -0.23
HCFC1P51610 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HCFC1P51610 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC13.62□□□□□ -0.23
HCFC1P51610 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
HCFC1P51610 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC13.62□□□□□ -0.23
HCFC1P51610 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HCFC1P51610 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC13.62□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms